RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SMIM10L2AP0DMW4 78 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 SMIM10L2BP0DMW5 78 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 CCND3P30281 292 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ADSSP30520 456 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 EFNA5P52803 228 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 PRMT2P55345 433 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ICAM4Q14773 271 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 NOMO1Q15155 1222 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 MARCH8Q5T0T0 291 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 LILRA6Q6PI73 481 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ZBTB8OSQ8IWT0 167 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 LRRC8AQ8IWT6 810 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 RAVER1Q8IY67 606 aaKnown RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 LILRA3Q8N6C8 439 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 LINC01465Q8N7H1 131 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 XXYLT1Q8NBI6 393 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 RNF149Q8NC42 400 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 CCDC150Q8NCX0 1101 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 GPR156Q8NFN8 814 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 NRG4Q8WWG1 115 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 BICD1Q96G01 975 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 BORCS6Q96GS4 357 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 CBWD1Q9BRT8 395 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ADI1Q9BV57 179 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 UPF3AQ9H1J1 476 aaKnown RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 C2orf40Q9H1Z8 148 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 TRIM17Q9Y577 477 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ARID2Q68CP9 1835 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 PHLPP2Q6ZVD8 1323 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MYADML2A6NDP7 307 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 AKR1B15C9JRZ8 316 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 HNRNPDLO14979 420 aaKnown RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MAPK13O15264 365 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 STC2O76061 302 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 PIGRP01833 764 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 GJB1P08034 283 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 TPM1P09493 284 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 SFPQP23246 707 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 RGS19P49795 217 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 LIG4P49917 911 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 PURAQ00577 322 aaKnown RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 DUSP2Q05923 314 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 POU5F1BQ06416 359 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MCL1Q07820 350 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 TRIM14Q14142 442 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 GRM7Q14831 915 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 SYCP1Q15431 976 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 C19orf54Q5BKX5 351 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MAP3K21Q5TCX8 1036 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 NFRKBQ6P4R8 1299 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 SLC39A4Q6P5W5 647 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 Q6ZVL8 140 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 KIAA0319LQ8IZA0 1049 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 OR5M3Q8NGP4 307 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 OR2I1PQ8NGU4 316 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 POMGNT1Q8WZA1 660 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 LOXL4Q96JB6 756 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF668Q96K58 619 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 NLRP4Q96MN2 994 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 ERGIC2Q96RQ1 377 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MAP7D2Q96T17 732 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MTG1Q9BT17 334 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 NELFAQ9H3P2 528 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 RBM12Q9NTZ6 932 aaKnown RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 PLA2G3Q9NZ20 509 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 ST6GALNAC2Q9UJ37 374 aa7.87□□□□□ -1.15
UBE4B-204ENST00000462658 LUC7L2Q9Y383 392 aaKnown RBP7.87□□□□□ -1.15
UBE4B-204ENST00000462658 MYH11P35749 1972 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ALPK3Q96L96 1907 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 A0A087WZ62 844 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 SMIM35A0A1B0GVV1 85 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 C17orf102A2RUQ5 167 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 MBLAC1A4D2B0 266 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 GOLGA8IPA6NC78 632 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 GOLGA8JA6NMD2 632 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 INO80B-WBP1J3KQ70 363 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 SNUPNO95149 360 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 AFPP02771 609 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 VTNP04004 478 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 PRKCBP05771 671 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 CYP2C9P11712 490 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 KRT13P13646 458 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 CASP14P31944 242 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 MSX2P35548 267 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 RPS19P39019 145 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 MATR3P43243 847 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 KLK7P49862 253 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ADKP55263 362 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 WNT3AP56704 352 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 PTENP60484 403 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ADAM17P78536 824 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 CDC42EP1Q00587 391 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 GOLGA8FQ08AF8 430 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 GOLGA8DPQ0D2H9 430 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 LRMPQ12912 555 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 FOXL1Q12952 345 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms