RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 OR2T3Q8NH03 318 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SETD7Q8WTS6 366 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DDI1Q8WTU0 396 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 CYB5D2Q8WUJ1 264 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 UCMAQ8WVF2 138 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KCTD13Q8WZ19 329 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 MYO19Q96H55 970 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 BPIFA3Q9BQP9 254 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 NUP58Q9BVL2 599 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC2A11Q9BYW1 496 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 CIPCQ9C0C6 399 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DNAI2Q9GZS0 605 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 PCED1AQ9H1Q7 454 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 LHX5Q9H2C1 402 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DKK4Q9UBT3 224 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 LIMA1Q9UHB6 759 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 CYTH4Q9UIA0 394 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 STOML2Q9UJZ1 356 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SIK3Q9Y2K2 1263 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SNX11Q9Y5W9 270 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 MAST4O15021 2626 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 YJEFN3A6XGL0 299 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 E7ENQ6 273 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 PIK3R2O00459 728 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 EPHB6O15197 1021 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 MSI1O43347 362 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZBED1O96006 694 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 CYBBP04839 570 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 IGHV4-34P06331 123 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ACADMP11310 421 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ATP1A3P13637 1013 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 GNA15P30679 374 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 CLCN1P35523 988 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 GPD2P43304 727 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 GRIA4P48058 902 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 TKTL1P51854 596 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 COPB1P53618 953 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 DAOAP59103 153 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 RPS14P62263 151 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 KLHDC7AQ5VTJ3 777 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 FMNL3Q8IVF7 1028 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 FAM71AQ8IYT1 594 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 SCML4Q8N228 414 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ARHGAP18Q8N392 663 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 WFIKKN2Q8TEU8 576 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 CLEC4CQ8WTT0 213 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF606Q8WXB4 792 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 SNX19Q92543 992 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 BIRC7Q96CA5 298 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 LMLNQ96KR4 655 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 FAM81BQ96LP2 452 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 VPS16Q9H269 839 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 OSGEPQ9NPF4 335 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 PLCB1Q9NQ66 1216 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 PRSS16Q9NQE7 514 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 ABCB8Q9NUT2 735 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 HESX1Q9UBX0 185 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 SFMBT1Q9UHJ3 866 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 DNAJC12Q9UKB3 198 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 STRIP2Q9ULQ0 834 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 COL27A1Q8IZC6 1860 aaPredicted RBP8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 COL6A6A6NMZ7 2263 aa8.23□□□□□ -1.09
CDC42BPA-210ENST00000462553 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 LGALS16A8MUM7 142 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 H0Y8X5 98 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 TK2O00142 265 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 FOXN3O00409 490 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 PAPSS1O43252 624 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 THAP12O43422 761 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 PCDHGA12O60330 932 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 TSPAN3O60637 253 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 LETM1O95202 739 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SEMA4FO95754 770 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 IGLV3-27P01718 113 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 PABPC1P11940 636 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 LCP1P13796 627 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 UCHL3P15374 230 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC6A4P31645 630 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 CTSKP43235 329 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 JAM2P57087 298 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 DRAP1Q14919 205 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 IQCB1Q15051 598 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SMAD1Q15797 465 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 FNDC3BQ53EP0 1204 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 MPPE1Q53F39 396 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 FAM133BQ5BKY9 247 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 MSANTD2Q6P1R3 559 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 CHST9Q7L1S5 443 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 RSRC2Q7L4I2 434 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC47A2Q86VL8 602 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 WDTC1Q8N5D0 677 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 RHBDD1Q8TEB9 315 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 EDEM1Q92611 657 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 MYEOVQ96EZ4 313 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms