RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 ULK2Q8IYT8 1036 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 SPDL1Q96EA4 605 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 ANLNQ9NQW6 1124 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 DONSONQ9NYP3 566 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 PDCD11Q14690 1871 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 DNAH12Q6ZR08 3092 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 YJEFN3A6XGL0 299 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 PROCP04070 461 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 PTPN3P26045 913 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 ADRA1BP35368 520 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 ABCG1P45844 678 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 TBCCQ15814 346 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 SPANXN3Q5MJ09 141 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 STRA8Q7Z7C7 330 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 TLK2Q86UE8 772 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 CFAP61Q8NHU2 1237 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 KCTD13Q8WZ19 329 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 AZIN2Q96A70 460 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 SLC2A13Q96QE2 648 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 AGAP2Q99490 1192 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 CPNE1Q99829 537 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 SNX15Q9NRS6 342 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 STX18Q9P2W9 335 aaKnown RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 COPG2Q9UBF2 871 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 PLA2G4CQ9UP65 541 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 TIMM13Q9Y5L4 95 aaPredicted RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 WASF2Q9Y6W5 498 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 CENPFP49454 3210 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 SF3B1O75533 1304 aaKnown RBP eCLIP17.35■□□□□ 0.372e-7■■□□□ 13.7
ACTB-207ENST00000462494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 TM7SF2O76062 418 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 AMHP03971 560 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 PRKCGP05129 697 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 MYL3P08590 195 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 C6orf222P0C671 652 aaPredicted RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 NCAM1P13591 858 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 ITGA9Q13797 1035 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 DBN1Q16643 649 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 DNAL1Q4LDG9 190 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 GRTP1Q5TC63 336 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 C6orf163Q5TEZ5 329 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 ATG14Q6ZNE5 492 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 RIPOR1Q6ZS17 1223 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 PDZD4Q76G19 769 aaPredicted RBP17.35■□□□□ 0.37
ACTB-207ENST00000462494 BNIPLQ7Z465 357 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
ACTB-207ENST00000462494 POU5F2Q8N7G0 328 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 KCNK16Q96T55 309 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 LRRC40Q9H9A6 602 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 VANGL2Q9ULK5 521 aa17.35■□□□□ 0.37
ACTB-207ENST00000462494 LIN7AO14910 233 aaPredicted RBP17.34■□□□□ 0.37
ACTB-207ENST00000462494 ATP9BO43861 1147 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 AP1G2O75843 785 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 FYNP06241 537 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 ATP5BP06576 529 aaKnown RBP17.34■□□□□ 0.37
ACTB-207ENST00000462494 USP17L7P0C7H9 530 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 RALBP11234 206 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 PSEN2P49810 448 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 CAPRIN2Q6IMN6 1127 aaKnown RBP17.34■□□□□ 0.37
ACTB-207ENST00000462494 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.34■□□□□ 0.375e-7■■■□□ 15.5
ACTB-207ENST00000462494 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 APOL2Q9BQE5 337 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 GORASP1Q9BQQ3 440 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 SIKE1Q9BRV8 207 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 BFARQ9NZS9 450 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
ACTB-207ENST00000462494 TRIP12Q14669 1992 aaPredicted RBP17.34■□□□□ 0.37
ACTB-207ENST00000462494 I6L893 689 aaPredicted RBP17.33■□□□□ 0.37
ACTB-207ENST00000462494 PTGESO14684 152 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 ZBTB24O43167 697 aaPredicted RBP17.33■□□□□ 0.37
ACTB-207ENST00000462494 UPP2O95045 317 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 MX2P20592 715 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 BEX3Q00994 111 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 TUBB3Q13509 450 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 VWA5B1Q5TIE3 1220 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 C1orf146Q5VVC0 180 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 GPRIN1Q7Z2K8 1008 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 NET1Q7Z628 596 aaPredicted RBP17.33■□□□□ 0.37
ACTB-207ENST00000462494 SLC25A41Q8N5S1 370 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 PPFIBP2Q8ND30 876 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 SORT1Q99523 831 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 CRTAC1Q9NQ79 661 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 DDIT4Q9NX09 232 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 SLC7A8Q9UHI5 535 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 SLC45A1Q9Y2W3 748 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.37
ACTB-207ENST00000462494 MEIS3P2A8K0S8 358 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.36
ACTB-207ENST00000462494 AP2A1O95782 977 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 CPA3P15088 417 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 AOC1P19801 751 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 GRK2P25098 689 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 ARRB2P32121 409 aa17.33■□□□□ 0.36
ACTB-207ENST00000462494 GCKP35557 465 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms