RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TACR2P21452 398 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 PSMD8P48556 350 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 GALCP54803 685 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 CDK17Q00537 523 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 SULT2A1Q06520 285 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 ZC3H12AQ5D1E8 599 aaKnown RBP15.91■□□□□ 0.14
SKA3-204ENST00000462482 RABGAP1LQ5R372 815 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 C9orf64Q5T6V5 341 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 TTC39BQ5VTQ0 682 aaPredicted RBP15.91■□□□□ 0.14
SKA3-204ENST00000462482 RAP1GAP2Q684P5 730 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 DENND1BQ6P3S1 775 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 NCEH1Q6PIU2 408 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 LAYNQ6UX15 382 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 MMS22LQ6ZRQ5 1243 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 SND1Q7KZF4 910 aaKnown RBP eCLIP15.91■□□□□ 0.14
SKA3-204ENST00000462482 LMLNQ96KR4 655 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 MRGPRX3Q96LB0 322 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 NEUROG2Q9H2A3 272 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 THAP9Q9H5L6 903 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.91■□□□□ 0.14
SKA3-204ENST00000462482 INTS6Q9UL03 887 aaKnown RBP15.91■□□□□ 0.14
SKA3-204ENST00000462482 BTBD3Q9Y2F9 522 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 SLCO1B1Q9Y6L6 691 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 FRYQ5TBA9 3013 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 TTC34A8MYJ7 566 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 TAF4O00268 1085 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 BIN1O00499 593 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 YKT6O15498 198 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 TRUB2O95900 331 aaKnown RBP15.9■□□□□ 0.14
SKA3-204ENST00000462482 IL1BP01584 269 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 IGHV4-34P06331 123 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 ITGAVP06756 1048 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 GOT1P17174 413 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 C5AR1P21730 350 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 GNA15P30679 374 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 USP8P40818 1118 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 RPL34P49207 117 aaKnown RBP15.9■□□□□ 0.14
SKA3-204ENST00000462482 STX17P56962 302 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 SNX16P57768 344 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 MTA1Q13330 715 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 FSCBQ5H9T9 825 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 SYPL2Q5VXT5 272 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 DSG4Q86SJ6 1040 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 CREBRFQ8IUR6 639 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 OR14C36Q8NHC7 312 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 MYO19Q96H55 970 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 KREMEN1Q96MU8 473 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 SLC6A18Q96N87 628 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 NOX5Q96PH1 765 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 SRRTQ9BXP5 876 aaKnown RBP15.9■□□□□ 0.14
SKA3-204ENST00000462482 SLC4A5Q9BY07 1137 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 GDF3Q9NR23 364 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 ADAMTS1Q9UHI8 967 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 CNTN6Q9UQ52 1028 aa15.9■□□□□ 0.14
SKA3-204ENST00000462482 FAM208BQ5VWN6 2430 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 A0A1B0GTQ1 180 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 KCNU1A8MYU2 1149 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 E5RJQ4 531 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 PAPSS1O43252 624 aaPredicted RBP15.89■□□□□ 0.13
SKA3-204ENST00000462482 CD38P28907 300 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 CCR1P32246 355 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 CTSOP43234 321 aaPredicted RBP15.89■□□□□ 0.13
SKA3-204ENST00000462482 ARRB1P49407 418 aaPredicted RBP15.89■□□□□ 0.13
SKA3-204ENST00000462482 CCR5P51681 352 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 IL9RQ01113 521 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 MORC3Q14149 939 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 ELAVL3Q14576 367 aaKnown RBP15.89■□□□□ 0.13
SKA3-204ENST00000462482 C19orf48Q6RUI8 117 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 TMEM110Q86TL2 294 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 STK40Q8N2I9 435 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 MDM1Q8TC05 714 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 ZNF606Q8WXB4 792 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 ELF4Q99607 663 aaPredicted RBP15.89■□□□□ 0.13
SKA3-204ENST00000462482 SERGEFQ9UGK8 458 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 SLCO3A1Q9UIG8 710 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
SKA3-204ENST00000462482 PI4KAP42356 2102 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 SYNJ2BP-COX16A0A087WUM0 186 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3DA0A087WVF3 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3IA0A087WXS9 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3EA0A087X179 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3KA0A087X1G2 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3FA6NER0 549 aaPredicted RBP15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3LB9A6J9 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 CAPNS1P04632 268 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 GLI1P08151 1106 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3HP0C7X1 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 CDK4P11802 303 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 PDGFRAP16234 1089 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 MARSP56192 900 aaKnown RBP15.88■□□□□ 0.13
SKA3-204ENST00000462482 PDCLQ13371 301 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 ACCSLQ4AC99 568 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 EFHC1Q5JVL4 640 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 FAM46CQ5VWP2 391 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3GQ6DHY5 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3CQ6IPX1 549 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TBC1D3Q8IZP1 549 aaPredicted RBP15.88■□□□□ 0.13
SKA3-204ENST00000462482 MYEOVQ96EZ4 313 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms