RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 C9orf64Q5T6V5 341 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 TTC39BQ5VTQ0 682 aaPredicted RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 FBXL22Q6P050 247 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 RBM43Q6ZSC3 357 aaKnown RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 CCAR2Q8N163 923 aaKnown RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 C1orf216Q8TAB5 229 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 GPT2Q8TD30 523 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 STK33Q9BYT3 514 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 ZDHHC5Q9C0B5 715 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 BTBD1Q9H0C5 482 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 SLC32A1Q9H598 525 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 C6orf106Q9H6K1 298 aaPredicted RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 TAB2Q9NYJ8 693 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 EIF2B4Q9UI10 523 aaKnown RBP19.56■□□□□ 0.72
VARS-220ENST00000461874 SLCO3A1Q9UIG8 710 aa19.56■□□□□ 0.72
VARS-220ENST00000461874 NUMA1Q14980 2115 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 A0A1B0GVM2 712 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 TCAF2A6NFQ2 919 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 TTC34A8MYJ7 566 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 M0QYT0 321 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 BCAT2O15382 392 aaPredicted RBP19.55■□□□□ 0.72
VARS-220ENST00000461874 GJB3O75712 270 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 SEMA4FO95754 770 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 GABRB2P47870 512 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 GRIK2Q13002 908 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 AUHQ13825 339 aaKnown RBP19.55■□□□□ 0.72
VARS-220ENST00000461874 OTUD1Q5VV17 481 aaPredicted RBP19.55■□□□□ 0.72
VARS-220ENST00000461874 CDKAL1Q5VV42 579 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 CIR1Q86X95 450 aaPredicted RBP19.55■□□□□ 0.72
VARS-220ENST00000461874 DHX40Q8IX18 779 aaKnown RBP19.55■□□□□ 0.72
VARS-220ENST00000461874 IGSF8Q969P0 613 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 GBP4Q96PP9 640 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 NPY6RQ99463 290 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 SGK2Q9HBY8 427 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 RRN3Q9NYV6 651 aa19.55■□□□□ 0.72
VARS-220ENST00000461874 ITIH6Q6UXX5 1313 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 TARSL2A2RTX5 802 aaKnown RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 F8VZ95 297 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 RNASEH1O60930 286 aaKnown RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 CD59P13987 128 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 PDGFRAP16234 1089 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 SCNN1AP37088 669 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 PLK1P53350 603 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 OXCT1P55809 520 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 SLC14A1Q13336 389 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 TAF3Q5VWG9 929 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 CXorf57Q6NSI4 855 aaKnown RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 USP30Q70CQ3 517 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 NOP9Q86U38 636 aaKnown RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 NT5C3BQ969T7 300 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 C18orf8Q96DM3 657 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 RPRD1AQ96P16 312 aaPredicted RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 ADAM33Q9BZ11 813 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 PABPC3Q9H361 631 aaKnown RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.54■□□□□ 0.72
VARS-220ENST00000461874 SCML1Q9UN30 329 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.54■□□□□ 0.72
VARS-220ENST00000461874 HS3ST4Q9Y661 456 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 CACNA1BQ00975 2339 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 KNL1Q8NG31 2342 aa19.54■□□□□ 0.72
VARS-220ENST00000461874 MAP1BP46821 2468 aaKnown RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 ADAMTS9Q9P2N4 1935 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 EDDM13A0A1B0GTR0 161 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 PAGE1O75459 146 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 LSM8O95777 96 aaKnown RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 MZF1P28698 734 aaPredicted RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 CXCR3P49682 368 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 RNASE9P60153 205 aaKnown RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 CENPCQ03188 943 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 SULT2A1Q06520 285 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 KRT31Q15323 416 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 RNF219Q5W0B1 726 aaPredicted RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 ERICH1Q86X53 443 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 XYLT1Q86Y38 959 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 SNX19Q92543 992 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 RPL10LQ96L21 214 aaKnown RBP19.53■□□□□ 0.72
VARS-220ENST00000461874 VPS16Q9H269 839 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 GANQ9H2C0 597 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 PIGVQ9NUD9 493 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 VANGL2Q9ULK5 521 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 STAP1Q9ULZ2 295 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 WASF3Q9UPY6 502 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 NCKAP1Q9Y2A7 1128 aa19.53■□□□□ 0.72
VARS-220ENST00000461874 ADCY5O95622 1261 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 TFE3P19532 575 aaPredicted RBP19.52■□□□□ 0.72
VARS-220ENST00000461874 STK19P49842 368 aaPredicted RBP19.52■□□□□ 0.72
VARS-220ENST00000461874 IRAK1P51617 712 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 BNC1Q01954 994 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 SFSWAPQ12872 951 aaKnown RBP19.52■□□□□ 0.72
VARS-220ENST00000461874 CST6Q15828 149 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 C5orf22Q49AR2 442 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 BRMS1LQ5PSV4 323 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 C14orf80Q86SX3 495 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 MMAAQ8IVH4 418 aaKnown RBP19.52■□□□□ 0.72
VARS-220ENST00000461874 EPS8L1Q8TE68 723 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 GANCQ8TET4 914 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 PTPRN2Q92932 1015 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 BIRC7Q96CA5 298 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 ALG14Q96F25 216 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 PGAP3Q96FM1 320 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms