RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SGK2Q9HBY8 427 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 LMBRD1Q9NUN5 540 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 RRN3Q9NYV6 651 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 AJAP1Q9UKB5 411 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-207ENST00000461798 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 PI4KAP42356 2102 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 CHD8Q9HCK8 2581 aa9.47□□□□□ -0.89
BRCA1-207ENST00000461798 CKAP5Q14008 2032 aa9.46□□□□□ -0.89
BRCA1-207ENST00000461798 PCNX2A6NKB5 2137 aa9.46□□□□□ -0.89
BRCA1-207ENST00000461798 MEI4A8MW99 385 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 F5H5T6 163 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 H0Y626 953 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 BCAT2O15382 392 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 DAB1O75553 588 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 MOCS3O95396 460 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 MOCS2O96007 188 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 DNTTP04053 509 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ERBB2P04626 1255 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF883P0CG24 379 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ABCB4P21439 1286 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ACSL1P33121 698 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 SCNN1AP37088 669 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 GABRB2P47870 512 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ST8SIA6P61647 398 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 SULT2A1Q06520 285 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF252P-AS1Q0IIN9 211 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 CDH18Q13634 790 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 DRAP1Q14919 205 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 C5orf22Q49AR2 442 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PTPN20Q4JDL3 420 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PITRM1Q5JRX3 1037 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 C9orf64Q5T6V5 341 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 RAP1GAP2Q684P5 730 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF776Q68DI1 518 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 FBXL22Q6P050 247 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 MMS22LQ6ZRQ5 1243 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 FAM183BPQ6ZVS7 135 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF366Q8N895 744 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 TMEM35BQ8NCS4 154 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ENOX1Q8TC92 643 aaKnown RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 NT5C3BQ969T7 300 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PPP1R9BQ96SB3 815 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 FAM129BQ96TA1 746 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 GTPBP2Q9BX10 602 aaKnown RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 STK33Q9BYT3 514 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 BTBD1Q9H0C5 482 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PLCB1Q9NQ66 1216 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 FSCN3Q9NQT6 498 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 SAMSN1Q9NSI8 373 aaKnown RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 DDIT4Q9NX09 232 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ERVW-1Q9UQF0 538 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-207ENST00000461798 CACNA1EQ15878 2313 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 PCDH15Q96QU1 1955 aa9.46□□□□□ -0.9
BRCA1-207ENST00000461798 EDDM13A0A1B0GTR0 161 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 RNASEH1O60930 286 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 SIN3BO75182 1162 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 SEMA4FO95754 770 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 UCHL3P15374 230 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 CYP11B1P15538 503 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 MATKP42679 507 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 CTSOP43234 321 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 CXCR3P49682 368 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ECT2LQ008S8 904 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 BNC1Q01954 994 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 GRIK2Q13002 908 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 AUHQ13825 339 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 KCNJ12Q14500 433 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 TTC31Q49AM3 519 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 TCP11X2Q5H9J9 407 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 RABGAP1LQ5R372 815 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ACBD5Q5T8D3 534 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 OR6B2Q6IFH4 312 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 IL27RAQ6UWB1 636 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 RBM43Q6ZSC3 357 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 APCDD1Q8J025 514 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 CCAR2Q8N163 923 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ZCCHC9Q8N567 271 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 OR2I1PQ8NGU4 316 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ALG14Q96F25 216 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 PGAP3Q96FM1 320 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 NPY6RQ99463 290 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ORAI3Q9BRQ5 295 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 PABPC3Q9H361 631 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 MTG2Q9H4K7 406 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 C6orf106Q9H6K1 298 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 EIF2B4Q9UI10 523 aaKnown RBP9.45□□□□□ -0.9
BRCA1-207ENST00000461798 SLCO3A1Q9UIG8 710 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 NCKAP1Q9Y2A7 1128 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 TBC1D30Q9Y2I9 924 aa9.45□□□□□ -0.9
BRCA1-207ENST00000461798 CEP83Q9Y592 693 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms