RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 HIPK2Q9H2X6 1198 aa4.8□□□□□ -1.64
UBA3-204ENST00000461522 FSCN3Q9NQT6 498 aa4.8□□□□□ -1.64
UBA3-204ENST00000461522 IPO11Q9UI26 975 aaKnown RBP4.8□□□□□ -1.64
UBA3-204ENST00000461522 B3GNT3Q9Y2A9 372 aa4.8□□□□□ -1.64
UBA3-204ENST00000461522 KANK1Q14678 1352 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 INO80Q9ULG1 1556 aaPredicted RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 KDM5DQ9BY66 1539 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 APAF1O14727 1248 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 PMM2O15305 246 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 WNT1P04628 370 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 TRIM27P14373 513 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 HOXB2P14652 356 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 POLD2P49005 469 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 IRX6P78412 446 aaPredicted RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 SLC35G1Q2M3R5 365 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 P3H1Q32P28 736 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 ODF3L2Q3SX64 289 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 UBAP2Q5T6F2 1119 aaKnown RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 B4GALNT4Q76KP1 1039 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 KRT27Q7Z3Y8 459 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 TXLNBQ8N3L3 684 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 B4GALNT2Q8NHY0 566 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 BRI3BPQ8WY22 251 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 WDR83Q9BRX9 315 aaKnown RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 CA14Q9ULX7 337 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 UBE2J1Q9Y385 318 aaPredicted RBP4.79□□□□□ -1.64
UBA3-204ENST00000461522 DTNAQ9Y4J8 743 aa4.79□□□□□ -1.64
UBA3-204ENST00000461522 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 CLSPNQ9HAW4 1339 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 ARHGEF40Q8TER5 1519 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 SPTLC2O15270 562 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 NCK2O43639 380 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 ZC3H11AO75152 810 aaKnown RBP eCLIP4.78□□□□□ -1.64
UBA3-204ENST00000461522 PPP6R2O75170 966 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 FGF18O76093 207 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 ITGA5P08648 1049 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 SRGAP2BP0DMP2 458 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 SETQ01105 290 aaPredicted RBP4.78□□□□□ -1.64
UBA3-204ENST00000461522 CBFBQ13951 182 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 PTGR1Q14914 329 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 NUGGCQ68CJ6 796 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 ISM2Q6H9L7 571 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 GGT6Q6P531 493 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 RASGRP3Q8IV61 690 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 FAM47BQ8NA70 645 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 OR52N4Q8NGI2 321 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 EME1Q96AY2 570 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 C8orf48Q96LL4 319 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 HTATIP2Q9BUP3 242 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 MRPL44Q9H9J2 332 aaKnown RBP4.78□□□□□ -1.64
UBA3-204ENST00000461522 PRDM16Q9HAZ2 1276 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 FZD3Q9NPG1 666 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 SLC52A1Q9NWF4 448 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 WWOXQ9NZC7 414 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 UTS2RQ9UKP6 389 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 DIP2CQ9Y2E4 1556 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 NUP155O75694 1391 aa4.78□□□□□ -1.64
UBA3-204ENST00000461522 BCORL1Q5H9F3 1711 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 LMTK2Q8IWU2 1503 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 TSPOAP1O95153 1857 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 RPRD2Q5VT52 1461 aaKnown RBP4.77□□□□□ -1.65
UBA3-204ENST00000461522 A6NNC1 897 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 J3KTA2 159 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 GTPBP1O00178 669 aaKnown RBP4.77□□□□□ -1.65
UBA3-204ENST00000461522 TAF5LO75529 589 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 KAT7O95251 611 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 TNFSF4P23510 183 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 TM4SF4P48230 202 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 PGGT1BP53609 377 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 P2RX3P56373 397 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 PPATQ06203 517 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 CSHL1Q14406 222 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 KIAA1755Q5JYT7 1200 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 TRAPPC11Q7Z392 1133 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 DDIASQ8IXT1 998 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 TMEM199Q8N511 208 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 SLC22A17Q8WUG5 538 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 THOC3Q96J01 351 aaKnown RBP4.77□□□□□ -1.65
UBA3-204ENST00000461522 ZNF347Q96SE7 839 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 NECTIN3Q9NQS3 549 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 PCDHB7Q9Y5E2 793 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 NPATQ14207 1427 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 RAB3GAP2Q9H2M9 1393 aa4.77□□□□□ -1.65
UBA3-204ENST00000461522 RASA4BC9J798 803 aa4.76□□□□□ -1.65
UBA3-204ENST00000461522 RASA4O43374 803 aa4.76□□□□□ -1.65
UBA3-204ENST00000461522 CNTN5O94779 1100 aa4.76□□□□□ -1.65
UBA3-204ENST00000461522 PARNO95453 639 aaKnown RBP4.76□□□□□ -1.65
UBA3-204ENST00000461522 T-ENOLP0DO92 83 aa4.76□□□□□ -1.65
UBA3-204ENST00000461522 CHRNB1P11230 501 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms