RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PAGE1O75459 146 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 F9P00740 461 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 ACADMP11310 421 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 UNGP13051 313 aaPredicted RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 CD6P30203 668 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 RDXP35241 583 aaKnown RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 UBASH3AP57075 661 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 IRX4P78413 519 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 ATP11AP98196 1134 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 CENPCQ03188 943 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 EIF4EBP2Q13542 120 aaPredicted RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 CAMK2GQ13555 558 aaPredicted RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 PTPRNQ16849 979 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 PPM1JQ5JR12 505 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 SFMBT2Q5VUG0 894 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 METTL3Q86U44 580 aaKnown RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 ZNF366Q8N895 744 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 BAP1Q92560 729 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 HSPA12BQ96MM6 686 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 SELENOOQ9BVL4 669 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 NUSAP1Q9BXS6 441 aaKnown RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 ITM2CQ9NQX7 267 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 USP36Q9P275 1121 aaKnown RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 EVLQ9UI08 416 aaPredicted RBP15.88■□□□□ 0.13
VARS-219ENST00000461328 PILRBQ9UKJ0 227 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 VANGL2Q9ULK5 521 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 HS3ST4Q9Y661 456 aa15.88■□□□□ 0.13
VARS-219ENST00000461328 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 C4orf47A7E2U8 309 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 ADCY5O95622 1261 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 CFIP05156 583 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 TNFAIP3P21580 790 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 SDC4P31431 198 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 HOXD12P35452 270 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 CXCR3P49682 368 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 TPMTP51580 245 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 COPAP53621 1224 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 ST8SIA6P61647 398 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 AUHQ13825 339 aaKnown RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 CDO1Q16878 200 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 PITRM1Q5JRX3 1037 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 RNF219Q5W0B1 726 aaPredicted RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 FBXL22Q6P050 247 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 DNAJC24Q6P3W2 148 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 FAM131BQ86XD5 332 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 SLC41A1Q8IVJ1 513 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 CCAR2Q8N163 923 aaKnown RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 PGAP3Q96FM1 320 aaPredicted RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 TOE1Q96GM8 510 aaKnown RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 LMLNQ96KR4 655 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 PRMT1Q99873 361 aaKnown RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 ADAM33Q9BZ11 813 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 TMEM51Q9NW97 253 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 KIAA1522Q9P206 1035 aaPredicted RBP15.87■□□□□ 0.13
VARS-219ENST00000461328 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
VARS-219ENST00000461328 MUC22E2RYF6 1773 aaPredicted RBP15.86■□□□□ 0.13
VARS-219ENST00000461328 ANKRD62A6NC57 917 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 GJB6O95452 261 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 ASLP04424 464 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 KRT3P12035 628 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 PDGFRAP16234 1089 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 OXTRP30559 389 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 CSKP41240 450 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 NR1I3Q14994 352 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 DUOXA1Q1HG43 343 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 FSCBQ5H9T9 825 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 SYCP2LQ5T4T6 812 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 DAB2IPQ5VWQ8 1189 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 PEAR1Q5VY43 1037 aaPredicted RBP15.86■□□□□ 0.13
VARS-219ENST00000461328 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 SLC23A3Q6PIS1 610 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 LRRC31Q6UY01 552 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 RABEPKQ7Z6M1 372 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 PHF13Q86YI8 300 aaPredicted RBP15.86■□□□□ 0.13
VARS-219ENST00000461328 RGL4Q8IZJ4 473 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 CEP76Q8TAP6 659 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 RXFP2Q8WXD0 754 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 FOXJ1Q92949 421 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 NT5C3BQ969T7 300 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 TTC17Q96AE7 1141 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 GPR174Q9BXC1 333 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 TSPY26PQ9H489 355 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 FBRSQ9HAH7 460 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 TMEM9BQ9NQ34 198 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 ARHGEF38Q9NXL2 777 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 WSB2Q9NYS7 404 aaPredicted RBP15.86■□□□□ 0.13
VARS-219ENST00000461328 SUN2Q9UH99 717 aa15.86■□□□□ 0.13
VARS-219ENST00000461328 TNRC6BQ9UPQ9 1833 aaKnown RBP15.86■□□□□ 0.13
VARS-219ENST00000461328 CKAP5Q14008 2032 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 MEI4A8MW99 385 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 TMCO5BA8MYB1 307 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 TPM3P06753 285 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 ENGP17813 658 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 MAPK8P45983 427 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 NUMBP49757 651 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 OXCT1P55809 520 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 KLHL30Q0D2K2 578 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms