RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-209	ENST00000460940	E2F5	Q15329	346 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	HSF5	Q4G112	596 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-209	ENST00000460940	MAMSTR	Q6ZN01	415 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	ANKS1B	Q7Z6G8	1248 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	DNAAF5	Q86Y56	855 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	TMTC1	Q8IUR5	882 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-209	ENST00000460940	LGI2	Q8N0V4	545 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	KCNV2	Q8TDN2	545 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	P2RY11	Q96G91	374 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	KCNH6	Q9H252	994 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	LUC7L	Q9NQ29	371 aa	Known RBP	11.44	□□□□□ -0.58
APTX-209	ENST00000460940	PLK2	Q9NYY3	685 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	UVRAG	Q9P2Y5	699 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	MYO1A	Q9UBC5	1043 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	INTU	Q9ULD6	942 aa		11.44	□□□□□ -0.58
APTX-209	ENST00000460940	TBC1D3B	A6NDS4	549 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ATG13	O75143	517 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	CISD3	P0C7P0	127 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ADRA1B	P35368	520 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	CYLC1	P35663	651 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ATXN1	P54253	815 aa	Known RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	OGDH	Q02218	1023 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	NRG1	Q02297	640 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	AUH	Q13825	339 aa	Known RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ACAP1	Q15027	740 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	EIF4H	Q15056	248 aa	Known RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	C5orf22	Q49AR2	442 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	SPEM1	Q8N4L4	309 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	WFIKKN2	Q8TEU8	576 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	EZH1	Q92800	747 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ACD	Q96AP0	544 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	NUP85	Q9BW27	656 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ANLN	Q9NQW6	1124 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	RBM12	Q9NTZ6	932 aa	Known RBP	11.43	□□□□□ -0.58
APTX-209	ENST00000460940	MUC6	Q6W4X9	2439 aa		11.43	□□□□□ -0.58
APTX-209	ENST00000460940	ATXN2	Q99700	1313 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940		A0A1B0GVM2	712 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	TCAF2	A6NFQ2	919 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CHURC1-FNTB	B4DL54	471 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940		K7EQS6	105 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	ARHGAP6	O43182	974 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	GALR2	O43603	387 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	RNF40	O75150	1001 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	RNF8	O76064	485 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	LCA5L	O95447	670 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	SGSH	P51688	502 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	OXCT1	P55809	520 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	RPS24	P62847	133 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MRPS21	P82921	87 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CDH18	Q13634	790 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	SH3PXD2A	Q5TCZ1	1133 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	FBXL22	Q6P050	247 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CHST9	Q7L1S5	443 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	TRMT11	Q7Z4G4	463 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MFN1	Q8IWA4	741 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	NIPA2	Q8N8Q9	360 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	FIBIN	Q8TAL6	211 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	ARHGEF26	Q96DR7	871 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	RPRD1A	Q96P16	312 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	OSBPL2	Q9H1P3	480 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	IP6K2	Q9UHH9	426 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	STARD13	Q9Y3M8	1113 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MYOF	Q9NZM1	2061 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CACNA1H	O95180	2353 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	IGLV3-10	A0A075B6K4	115 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940		I6L893	689 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	PPP1R12A	O14974	1030 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	NPC1	O15118	1278 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CLDN11	O75508	207 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	LUC7L3	O95232	432 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	PAPSS2	O95340	614 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	IPO7	O95373	1038 aa	Known RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	PCK1	P35558	622 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CCR3	P51677	355 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	ZNF252P-AS1	Q0IIN9	211 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MESP2	Q0VG99	397 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MTAP	Q13126	283 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	PIGH	Q14442	188 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	HSP90B2P	Q58FF3	399 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	EFHC2	Q5JST6	749 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940		Q6ZS52	159 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	SLFN11	Q7Z7L1	901 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	USP33	Q8TEY7	942 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	MYEOV	Q96EZ4	313 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	PACSIN1	Q9BY11	444 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	SIK2	Q9H0K1	926 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	RETREG1	Q9H6L5	497 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-209	ENST00000460940	CTTNBP2NL	Q9P2B4	639 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	ANAPC7	Q9UJX3	599 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	VANGL2	Q9ULK5	521 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	HCN4	Q9Y3Q4	1203 aa		11.42	□□□□□ -0.58
APTX-209	ENST00000460940	TIMM44	O43615	452 aa		11.41	□□□□□ -0.58
APTX-209	ENST00000460940	PABPC1	P11940	636 aa	Known RBP	11.41	□□□□□ -0.58
APTX-209	ENST00000460940	HLA-F	P30511	346 aa		11.41	□□□□□ -0.58
APTX-209	ENST00000460940	SPA17	Q15506	151 aa		11.41	□□□□□ -0.58
APTX-209	ENST00000460940	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.41	□□□□□ -0.58

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