RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CCHCR1Q8TD31 782 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 RIN2Q8WYP3 895 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 SEC14L1Q92503 715 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SEPT5Q99719 369 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 ACTR5Q9H9F9 607 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 DDIT4Q9NX09 232 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 RRN3Q9NYV6 651 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ASIC3Q9UHC3 531 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 MTMR11A4FU01 709 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 TNFRSF10BO14763 440 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 HOXC13P31276 330 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 MAGEA11P43364 429 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 ARSEP51690 589 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 GEMIN4P57678 1058 aaKnown RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 SMARCB1Q12824 385 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 TRIP13Q15645 432 aaPredicted RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 PSMD5Q16401 504 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 DPYSL2Q16555 572 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 OTUD1Q5VV17 481 aaPredicted RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 RSPO2Q6UXX9 243 aaPredicted RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 NUP93Q8N1F7 819 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 EIF1ADQ8N9N8 165 aaKnown RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 SPERTQ8NA61 448 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 STKLD1Q8NE28 680 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 FBXO22Q8NEZ5 403 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 ANKRD27Q96NW4 1050 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 ZNF670Q9BS34 389 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 CENPHQ9H3R5 247 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 RC3H2Q9HBD1 1191 aaKnown RBP10.67□□□□□ -0.7
HERC4-207ENST00000460168 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.67□□□□□ -0.7
HERC4-207ENST00000460168 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 SNX24Q9Y343 169 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 PCDHGB3Q9Y5G1 929 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 COL4A6Q14031 1691 aa10.67□□□□□ -0.7
HERC4-207ENST00000460168 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 TBC1D4O60343 1298 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 SUPT3HO75486 399 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 APOC2P02655 101 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 LAG3P18627 525 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 TUFMP49411 452 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 GPR15P49685 360 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 YWHAGP61981 247 aaKnown RBP eCLIP10.66□□□□□ -0.7
HERC4-207ENST00000460168 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 ANKRD20A8PQ5CZ79 823 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 BTBD8Q5XKL5 378 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 DRICH1Q6PGQ1 229 aaPredicted RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 RNF19BQ6ZMZ0 732 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 SYDE1Q6ZW31 735 aaPredicted RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 CCDC13Q8IYE1 715 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 P3H4Q92791 437 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 RNF157Q96PX1 679 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 UQCC2Q9BRT2 126 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FBXO44Q9H4M3 255 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 ABCC13Q9NSE7 274 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FAM153AQ9UHL3 310 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 MYO16Q9Y6X6 1858 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 APOL1O14791 398 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 MCF2LO15068 1137 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 SNX2O60749 519 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 SOAT2O75908 522 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 F9P00740 461 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 SOD2P04179 222 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 ECHS1P30084 290 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 L1CAMP32004 1257 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 GBP1P32455 592 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 OR1D2P34982 312 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 ARL4AP40617 200 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 ETV3P41162 512 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 VPS41P49754 854 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 DRG2P55039 364 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 PLTPP55058 493 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 VCPP55072 806 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 TUBA4AP68366 448 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 DUSP4Q13115 394 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 CALCOCO2Q13137 446 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.7
HERC4-207ENST00000460168 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 NXNQ6DKJ4 435 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 DENND5BQ6ZUT9 1274 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 BNIPLQ7Z465 357 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 GPR152Q8TDT2 470 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 BADQ92934 168 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 TRAPPC9Q96Q05 1148 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FMO2Q99518 471 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 VN1R3Q9BXE9 311 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FRMD8P1Q9BZ68 369 aaPredicted RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 MTRRQ9UBK8 725 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 FZD10Q9ULW2 581 aa10.66□□□□□ -0.7
HERC4-207ENST00000460168 MRPL42Q9Y6G3 142 aaKnown RBP10.66□□□□□ -0.7
HERC4-207ENST00000460168 WDR27A2RRH5 827 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 SGK1O00141 431 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 FGBP02675 491 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms