RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PIRTP0C851 137 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 OTUD1Q5VV17 481 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 TMC7Q7Z402 723 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 SCD5Q86SK9 330 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 ST13P5Q8NFI4 369 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 AGR3Q8TD06 166 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 TCP10LQ8TDR4 215 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 CENPIQ92674 756 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 CRISPLD1Q9H336 500 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 CATSPERBQ9H7T0 1116 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 TLR8Q9NR97 1041 aaKnown RBP9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 OSER1Q9NX31 292 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 SYBUQ9NX95 663 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 PRKAG2Q9UGJ0 569 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 RABGEF1Q9UJ41 708 aa9.59□□□□□ -0.87
NUDCD3-203ENST00000460110 M0QZQ0 153 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CHADO15335 359 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 IRAK2O43187 625 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CNTN5O94779 1100 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TOP3BO95985 862 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TYMPP19971 482 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 OR1E1P30953 314 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 MMP13P45452 471 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 PGGT1BP53609 377 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 GSCP56915 257 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CD300LGQ6UXG3 332 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 UNC5AQ6ZN44 842 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 DENND1CQ8IV53 801 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 LGI2Q8N0V4 545 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 ARMC2Q8NEN0 867 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 OR6P1Q8NGX9 317 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 AZIN2Q96A70 460 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TBC1D31Q96DN5 1066 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SERPINB11Q96P15 392 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 QKIQ96PU8 341 aaKnown RBP eCLIP9.58□□□□□ -0.883e-6■■■■□ 21.5
NUDCD3-203ENST00000460110 SLC2A13Q96QE2 648 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 FICDQ9BVA6 458 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 C20orf96Q9NUD7 363 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 PLK2Q9NYY3 685 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 IPO11Q9UI26 975 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CAPN7Q9Y6W3 813 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 GON4LQ3T8J9 2241 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 A0A0G2JND7 137 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CCNB1P14635 433 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SP100P23497 879 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 C16orf46Q6P387 395 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 RPAINQ86UA6 219 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CAND1Q86VP6 1230 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 MTMR11A4FU01 709 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 HHLA1C9JL84 531 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CCL22O00626 93 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 OPHN1O60890 802 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 KRT38O76015 456 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 GJA1P17302 382 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 PTPN3P26045 913 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TYK2P29597 1187 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 ZBTB17Q13105 803 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC1A5Q15758 541 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TCTN1Q2MV58 587 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 USP41Q3LFD5 358 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 VSTM1Q6UX27 236 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 MFSD3Q96ES6 412 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 CYP2S1Q96SQ9 504 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 TMEM106CQ9BVX2 250 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC39A8Q9C0K1 460 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 ACSS3Q9H6R3 686 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 XAB2Q9HCS7 855 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 ACSS2Q9NR19 701 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC17A7Q9P2U7 560 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 SCN10AQ9Y5Y9 1956 aa9.58□□□□□ -0.88
NUDCD3-203ENST00000460110 E9PAM4 449 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 HOXA2O43364 376 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 CHRNA4P43681 627 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 CXCR3P49682 368 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 DEFB103AP81534 67 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 KCNJ11Q14654 390 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 ITPRIPL1Q6GPH6 555 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC39A5Q6ZMH5 540 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 TRABD2AQ86V40 505 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 LRRC43Q8N309 656 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 CASD1Q96PB1 797 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 MRPL9Q9BYD2 267 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 CHRAC1Q9NRG0 131 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 PHF24Q9UPV7 400 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 BHMG1C9JSJ3 638 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 GNRH1P01148 92 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 URODP06132 367 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 CKMP06732 381 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 SYN1P17600 705 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 FDFT1P37268 417 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 AVPR1AP37288 418 aa9.57□□□□□ -0.88
NUDCD3-203ENST00000460110 RPL10AP62906 217 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms