RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 C1orf74Q96LT6 269 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 NPY6RQ99463 290 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ACP6Q9NPH0 428 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ANO10Q9NW15 660 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ADAMTS1Q9UHI8 967 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ANGPTL2Q9UKU9 493 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 FZD4Q9ULV1 537 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ERVW-1Q9UQF0 538 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 NCKAP1Q9Y2A7 1128 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 TMEM131Q92545 1883 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 F8VZ95 297 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 ALOX15BO15296 676 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 CLDN11O75508 207 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 GJB3O75712 270 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 MOCS2O96007 188 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 NOVA1P51513 510 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 RPS14P62263 151 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 RAPGEF1Q13905 1077 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 SLC25A52Q3SY17 297 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 PITRM1Q5JRX3 1037 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 N4BP2L1Q5TBK1 243 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 RNF219Q5W0B1 726 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 TRIM72Q6ZMU5 477 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 ERICH1Q86X53 443 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 CCAR2Q8N163 923 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 CARNMT1Q8N4J0 409 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 C1orf216Q8TAB5 229 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 ADAM32Q8TC27 787 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 CYB5D2Q8WUJ1 264 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 RNF34Q969K3 372 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 GPR174Q9BXC1 333 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 BTBD1Q9H0C5 482 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 SLC6A17Q9H1V8 727 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 PABPC3Q9H361 631 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 SAMSN1Q9NSI8 373 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 ARHGEF38Q9NXL2 777 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 STIM2Q9P246 746 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 INTS6Q9UL03 887 aaKnown RBP10.33□□□□□ -0.76
HDLBP-228ENST00000459788 TBC1D30Q9Y2I9 924 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 PCDHGB2Q9Y5G2 931 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 FHOD1Q9Y613 1164 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 USP24Q9UPU5 2620 aa10.33□□□□□ -0.76
HDLBP-228ENST00000459788 C10orf142B7Z368 130 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 PES1O00541 588 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 BCAT2O15382 392 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 DFNA5O60443 496 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 TRIM16O95361 564 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 SEMA4FO95754 770 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 CER1O95813 267 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 ADH1BP00325 375 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 ERBB2P04626 1255 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 HLA-EP13747 358 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 RDXP35241 583 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 NUDT1P36639 197 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 GRIA4P48058 902 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 AFF3P51826 1226 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 CDH4P55283 916 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 APBA1Q02410 837 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 ELAVL3Q14576 367 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 KRT31Q15323 416 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 TAF5Q15542 800 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 STX1AQ16623 288 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 C9orf64Q5T6V5 341 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 SH3PXD2AQ5TCZ1 1133 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 DCAF12L1Q5VU92 463 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 RAP1GAP2Q684P5 730 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 FBXL22Q6P050 247 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF783Q6ZMS7 281 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 BNIPLQ7Z465 357 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 DSG4Q86SJ6 1040 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 PASD1Q8IV76 773 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 MINDY1Q8N5J2 469 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 EPS8L1Q8TE68 723 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 GANQ9H2C0 597 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 WDCPQ9H6R7 721 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 LIMA1Q9UHB6 759 aaKnown RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 AJAP1Q9UKB5 411 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-228ENST00000459788 PLXNA2O75051 1894 aa10.32□□□□□ -0.76
HDLBP-228ENST00000459788 KNTC1P50748 2209 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 IGLV3-10A0A075B6K4 115 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 M0QYT0 321 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 SLC7A4O43246 635 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ATP9BO43861 1147 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ENDOD1O94919 500 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CYP1A1P04798 512 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 C5AR1P21730 350 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CD27P26842 260 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CCR5P51681 352 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 GSCP56915 257 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 JAM2P57087 298 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 NOMO3P69849 1222 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms