RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 METTL18O95568 372 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 PEX11BO96011 259 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 IFNB1P01574 187 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 LRG1P02750 347 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 RHOP08100 348 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 MBL2P11226 248 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 EPHB2P29323 1055 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 CORO1AP31146 461 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 GBP1P32455 592 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ATP5C1P36542 298 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 ACVRL1P37023 503 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ARL4AP40617 200 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ATP5OP48047 213 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 HCAR3P49019 387 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 TUBP50607 506 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ITGA8P53708 1063 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 RPS24P62847 133 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 GALNT2Q10471 571 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 HYAL1Q12794 435 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 TFDP2Q14188 446 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 VEPH1Q14D04 833 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 RWDD4Q6NW29 188 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 LEKR1Q6ZMV7 388 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 Q6ZNB5 142 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 SND1Q7KZF4 910 aaKnown RBP eCLIP8.99□□□□□ -0.97
RIF1-208ENST00000457745 GRASPQ7Z6J2 395 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 CHSY1Q86X52 802 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 LGI2Q8N0V4 545 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ZNF276Q8N554 614 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ATL2Q8NHH9 583 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 CPT1BQ92523 772 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 P3H4Q92791 437 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 ART4Q93070 314 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 TBC1D31Q96DN5 1066 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 NSMCE3Q96MG7 304 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 NCAPGQ9BPX3 1015 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 TTYH1Q9H313 450 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 DNMT3LQ9UJW3 386 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 AGO1Q9UL18 857 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 ZNF148Q9UQR1 794 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 DRG1Q9Y295 367 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 RWDD3Q9Y3V2 267 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 KIF26AQ9ULI4 1882 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 MYO18AQ92614 2054 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 DOCK8Q8NF50 2099 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 NUP210Q8TEM1 1887 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 BCLAF3A2AJT9 711 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 CCDC151A5D8V7 595 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 DRGXA6NNA5 263 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 SGK1O00141 431 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 KCNK1O00180 336 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 KCNN4O15554 427 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 ACSL4O60488 711 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 GLDCP23378 1020 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 BMP8BP34820 402 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 AIF1P55008 147 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 PLTPP55058 493 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 SMAD3P84022 425 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 RING1Q06587 406 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 DLX2Q07687 328 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 GPS1Q13098 491 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 ADGRE1Q14246 886 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 CBX2Q14781 532 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 BRD3Q15059 726 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 PPP1R7Q15435 360 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 P3H1Q32P28 736 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 C5orf22Q49AR2 442 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 MSS51Q4VC12 460 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 ODF2Q5BJF6 829 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 SLC45A4Q5BKX6 768 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 TCEAL5Q5H9L2 206 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 RNASEH2BQ5TBB1 312 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 IZUMO3Q5VZ72 239 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 HIBCHQ6NVY1 386 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 DARS2Q6PI48 645 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 KLHDC10Q6PID8 442 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 TMC5Q6UXY8 1006 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 CCDC149Q6ZUS6 474 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 ZNF534Q76KX8 674 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 MAP7D3Q8IWC1 876 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 TDHQ8IZJ6 230 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 RTL3Q8N8U3 475 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 CCDC26Q8TAB7 109 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 USP33Q8TEY7 942 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 MAIP1Q8WWC4 291 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 PRCCQ92733 491 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 TIFAQ96CG3 184 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 RTP4Q96DX8 246 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 TRIM62Q9BVG3 475 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 MAK16Q9BXY0 300 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 PCDH9Q9HC56 1237 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 OLA1Q9NTK5 396 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms