RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 IRAK1P51617 712 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 AIF1P55008 147 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 GSDMDP57764 484 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 KDSRQ06136 332 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 LRRC32Q14392 662 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PIGHQ14442 188 aaPredicted RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 GEN1Q17RS7 908 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 FSCBQ5H9T9 825 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 FAM72AQ5TYM5 149 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 MANEALQ5VSG8 457 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 DAB2IPQ5VWQ8 1189 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 TMEM215Q68D42 235 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 FAM72DQ6L9T8 149 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 SCYL2Q6P3W7 929 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PKN3Q6P5Z2 889 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 Q6ZS52 159 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 CYP4V2Q6ZWL3 525 aaPredicted RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 FAM72BQ86X60 149 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PYROXD2Q8N2H3 581 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 NIPA2Q8N8Q9 360 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF564Q8TBZ8 553 aaPredicted RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 USP33Q8TEY7 942 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 RPRD1AQ96P16 312 aaPredicted RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PEBP4Q96S96 227 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 OSGEPQ9NPF4 335 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 C2orf42Q9NWW7 574 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 CTTNBP2NLQ9P2B4 639 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PPARGC1AQ9UBK2 798 aaKnown RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF212Q9UDV6 495 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PCSK1NQ9UHG2 260 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 ANAPC7Q9UJX3 599 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 REXO2Q9Y3B8 237 aaKnown RBP10.37□□□□□ -0.75
ATG4A-206ENST00000457035 ABCA7Q8IZY2 2146 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 SPAG17Q6Q759 2223 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 CKAP5Q14008 2032 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 A0A1B0GVM2 712 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TCAF2A6NFQ2 919 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CHURC1-FNTBB4DL54 471 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 SRGAP2O75044 1071 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 MTA2O94776 668 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 LUC7L3O95232 432 aaKnown RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TCF4P15884 667 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 DESP17661 470 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 IL1R2P27930 398 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 L1CAMP32004 1257 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CD70P32970 193 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CDH4P55283 916 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 MRPS21P82921 87 aaKnown RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 MTAPQ13126 283 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 SEMA3BQ13214 749 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 SPA17Q15506 151 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ALFQ53S48 1182 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 RABGAP1LQ5R372 815 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TTC39BQ5VTQ0 682 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 LRRC31Q6UY01 552 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ASCL5Q7RTU5 278 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ADIPOR2Q86V24 386 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CIR1Q86X95 450 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 RHOT2Q8IXI1 618 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 CARNMT1Q8N4J0 409 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 SPEM1Q8N4L4 309 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 NCAPGQ9BPX3 1015 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ABCB8Q9NUT2 735 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 MPP6Q9NZW5 540 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 INTS6Q9UL03 887 aaKnown RBP10.36□□□□□ -0.75
ATG4A-206ENST00000457035 USP18Q9UMW8 372 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TFR2Q9UP52 801 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
ATG4A-206ENST00000457035 EML5Q05BV3 1969 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 H0Y626 953 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 TIMM44O43615 452 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 PRPSAP2O60256 369 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CLDN11O75508 207 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 LRIG2O94898 1065 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 PROSCO94903 275 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 PABPC1P11940 636 aaKnown RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 HNRNPLP14866 589 aaKnown RBP eCLIP10.35□□□□□ -0.758e-11■■■□□ 18.4
ATG4A-206ENST00000457035 ARHGAP25P42331 645 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 PLK1P53350 603 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 SEC13P55735 322 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 LMAN2Q12907 356 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CA9Q16790 459 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 BOLA3Q53S33 107 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 C2orf27AQ580R0 203 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 EFHC2Q5JST6 749 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CXorf57Q6NSI4 855 aaKnown RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CHST9Q7L1S5 443 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms