RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 C18orf25Q96B23 403 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 CCDC136Q96JN2 1154 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 ACE2Q9BYF1 805 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 MKRN2Q9H000 416 aaKnown RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 C6orf106Q9H6K1 298 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 TOPORSQ9NS56 1045 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 BARHL2Q9NY43 387 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 WRAP73Q9P2S5 460 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 DEC1Q9P2X7 70 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 UXTQ9UBK9 157 aaPredicted RBP6.65□□□□□ -1.34
COMMD3-204ENST00000456711 VPS4AQ9UN37 437 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 PCDHA4Q9UN74 947 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 PCDHB6Q9Y5E3 794 aa6.65□□□□□ -1.34
COMMD3-204ENST00000456711 PRAMEF27A3QJZ7 478 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 LRRIQ4A6NIV6 560 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 ADAMTS3O15072 1205 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 HNRNPRO43390 633 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 EDIL3O43854 480 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 RTN2O75298 545 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 TULP3O75386 442 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 NEFLP07196 543 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 HAPLN1P10915 354 aaPredicted RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 KCNE1P15382 129 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 HDCP19113 662 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 BMP6P22004 513 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 CD27P26842 260 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 KIR3DL1P43629 444 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 ARRB1P49407 418 aaPredicted RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 YARSP54577 528 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 POLE2P56282 527 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 INPP5AQ14642 412 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 KCNB1Q14721 858 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 SLC39A12Q504Y0 691 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 CDCA2Q69YH5 1023 aaPredicted RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 BORAQ6PGQ7 559 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 RSRC2Q7L4I2 434 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 TIPARPQ7Z3E1 657 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 RALYLQ86SE5 291 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 CDH24Q86UP0 819 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 FAM114A1Q8IWE2 563 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 NAT16Q8N8M0 369 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 MFSD2AQ8NA29 543 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 SPPL2BQ8TCT7 592 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 BIRC7Q96CA5 298 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 GRAMD1AQ96CP6 724 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 SIPA1Q96FS4 1042 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 SORCS2Q96PQ0 1159 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 CHMP4BQ9H444 224 aaKnown RBP6.64□□□□□ -1.35
COMMD3-204ENST00000456711 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 UBE4BO95155 1302 aa6.64□□□□□ -1.35
COMMD3-204ENST00000456711 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 WASH3PC4AMC7 463 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ACKR2O00590 384 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 EIF1AYO14602 144 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TSPAN3O60637 253 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 PLXNA2O75051 1894 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TNFSF15O95150 251 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 LUC7L3O95232 432 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 C8BP07358 591 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 THEGLP0DJG4 465 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TYMPP19971 482 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 AARSP49588 968 aaKnown RBP eCLIP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 PDE6CP51160 858 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 MLLT10P55197 1068 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ANTXR2P58335 489 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 DAB2P98082 770 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 GAD2Q05329 585 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 STARD3Q14849 445 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TGIF1Q15583 401 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 LY6G5CQ5SRR4 150 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 BTBD8Q5XKL5 378 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 SPNS3Q6ZMD2 512 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 FAM124AQ86V42 546 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 HEATR4Q86WZ0 1026 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TMPRSS6Q8IU80 811 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ZBTB8OSQ8IWT0 167 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ANKHD1Q8IWZ3 2542 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 COL27A1Q8IZC6 1860 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 STKLD1Q8NE28 680 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 OR10T2Q8NGX3 314 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 C2orf15Q8WU43 125 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 PRCCQ92733 491 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 SKA1Q96BD8 255 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TRMT2BQ96GJ1 504 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ATXN7L3BQ96GX2 97 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 Q96M66 194 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ORAI3Q9BRQ5 295 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 CCDC94Q9BW85 323 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ZCWPW1Q9H0M4 648 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 TMEM245Q9H330 911 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 RPF1Q9H9Y2 349 aaKnown RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 C6orf50Q9HD87 102 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ZNF71Q9NQZ8 489 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-204ENST00000456711 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
COMMD3-204ENST00000456711 PMS2P1A4D2B8 440 aa6.62□□□□□ -1.35
COMMD3-204ENST00000456711 OR14I1A6ND48 311 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms