RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 NDFIP2Q9NV92 336 aa13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 TMEM248Q9NWD8 314 aa13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 PAK5Q9P286 719 aa13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
CASC4P1-201ENST00000456608 PER2O15055 1255 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CNTN5O94779 1100 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 FGF19O95750 216 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 LATS1O95835 1130 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 HDCP19113 662 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SLC6A4P31645 630 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 BMP8BP34820 402 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 GARSP41250 739 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CCR2P41597 374 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SLC11A2P49281 568 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SLC7A9P82251 487 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 AP1B1Q10567 949 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ALFQ53S48 1182 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 C4orf22Q6V702 233 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PCGF5Q86SE9 256 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DENND1CQ8IV53 801 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 UMODL1-AS1Q8N2C9 162 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 TSEN2Q8NCE0 465 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CPT1BQ92523 772 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 MYEOVQ96EZ4 313 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 P2RY11Q96G91 374 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CELF6Q96J87 481 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 TSGA13Q96PP4 275 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 GCNAQ96QF7 691 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 VIPAS39Q9H9C1 493 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ZNF212Q9UDV6 495 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 STOML2Q9UJZ1 356 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SHOC2Q9UQ13 582 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 HCFC2Q9Y5Z7 792 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 NUP210Q8TEM1 1887 aaPredicted RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CEP290O15078 2479 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 A0A0A0MRY4 1105 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 A0A1W2PRU2 124 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 F5H5T6 163 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 GREM1O60565 184 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 XYLBO75191 536 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 MOSPD3O75425 235 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PAPLNO95428 1278 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 IRF1P10914 325 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 GJA1P17302 382 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ACTN2P35609 894 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CHKAP35790 457 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 NDST2P52849 883 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 ZXDBP98169 803 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DHX9Q08211 1270 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 WASHC5Q12768 1159 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DUSP6Q16828 381 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PPIL6Q8IXY8 311 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 LGI2Q8N0V4 545 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 MAB21L3Q8N8X9 362 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 NAT8LQ8N9F0 302 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 LEMD2Q8NC56 503 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CCNYQ8ND76 341 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CCDC110Q8TBZ0 833 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PRCCQ92733 491 aaPredicted RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 RPRD1AQ96P16 312 aaPredicted RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 PRKD2Q9BZL6 878 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SLC39A8Q9C0K1 460 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 NOL6Q9H6R4 1146 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 SMPD4Q9NXE4 827 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 AGO1Q9UL18 857 aaKnown RBP13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 HPCAL4Q9UM19 191 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 CPQQ9Y646 472 aa13.39□□□□□ -0.27
CASC4P1-201ENST00000456608 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 SMAPO00193 183 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 RNF103O00237 685 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 MTSS1O43312 755 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 RHOP08100 348 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 CCNCP24863 283 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 MAGEA6P43360 314 aa13.38□□□□□ -0.27
CASC4P1-201ENST00000456608 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms