RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CILP2Q8IUL8 1156 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 UNC5CLQ8IV45 518 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDH26Q8IXH8 852 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 FBXW8Q8N3Y1 598 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM52Q8NDY8 209 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 NUP43Q8NFH3 380 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 OR52K1Q8NGK4 314 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 URGCPQ8TCY9 931 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 C17orf50Q8WW18 174 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC5A11Q8WWX8 675 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 WASF1Q92558 559 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SAT2Q96F10 170 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PERPQ96FX8 193 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 NR1H4Q96RI1 486 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PIP5K1AQ99755 562 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 FERMT1Q9BQL6 677 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBB6Q9BUF5 446 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MTMR12Q9C0I1 747 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MCOLN1Q9GZU1 580 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCED1AQ9H1Q7 454 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 YY1AP1Q9H869 796 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MMRN2Q9H8L6 949 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLAMF7Q9NQ25 335 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRPV5Q9NQA5 729 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 HOMER3Q9NSC5 361 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 INTS13Q9NVM9 706 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 POLR3BQ9NW08 1133 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPP1R14DQ9NXH3 145 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARMCX3Q9UH62 379 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 FBXO40Q9UH90 709 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBE1Q9UJT0 475 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 INTS6Q9UL03 887 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 GRID1Q9ULK0 1009 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 BTBD3Q9Y2F9 522 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 COA3Q9Y2R0 106 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTRH2Q9Y3E5 179 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCDHGA1Q9Y5H4 931 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CLCA3PQ9Y6N3 262 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CAPN7Q9Y6W3 813 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 GOLGA6L10A0A0M3HER8 536 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MYOCOSA0A1B0GUC4 107 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM237BA0A1B0GVD1 139 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 FRMD3A2A2Y4 597 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 C7orf72A4D263 438 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 L7N2F9 121 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 HRKO00198 91 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ETV2O00321 342 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 O00370 1275 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 KRIT1O00522 736 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 VWA5AO00534 786 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TGFB1I1O43294 461 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TNFSF14O43557 240 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 VEGFDO43915 354 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PEX10O60683 326 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEMA7AO75326 666 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 C4BPAP04003 597 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MPOP05164 745 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 EIF2S1P05198 315 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 FYNP06241 537 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ASGR1P07306 291 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 C1QTNF9P0C862 333 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SELLP14151 372 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PDGFRAP16234 1089 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTPN1P18031 435 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ERCC2P18074 760 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SDHBP21912 280 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 FPR2P25090 351 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTPN3P26045 913 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 IDUAP35475 653 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRKCIP41743 596 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 STAT5BP51692 787 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CAPZA1P52907 286 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRKCEQ02156 737 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ROM1Q03395 351 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPATQ06203 517 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC20A2Q08357 652 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GOLGA8DPQ0D2H9 430 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SNTB1Q13884 538 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBB2AQ13885 445 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC29A2Q14542 456 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCLAFQ15004 111 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 HFEQ30201 348 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GALNTL6Q49A17 601 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD20A4Q4UJ75 823 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC39A12Q504Y0 691 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD20A8PQ5CZ79 823 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD20A2Q5SQ80 823 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD20A1Q5TYW2 823 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANKRD20A3Q5VUR7 823 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CST9LP1Q5W188 147 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 HLA-DQA1Q5Y7H0 255 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CENPPQ6IPU0 288 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRNIPQ6NTE8 343 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MTHFD1LQ6UB35 978 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 LRSAM1Q6UWE0 723 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCTD1Q719H9 257 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms