RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 EPAS1Q99814 870 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 DEC1Q9P2X7 70 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 NDRG2Q9UN36 371 aaKnown RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 MTF2Q9Y483 593 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 MIA3Q5JRA6 1907 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 KANSL1LA0AUZ9 987 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 TMEM221A6NGB7 291 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 H0Y626 953 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 M0R296 226 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 EEF2KO00418 725 aaKnown RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CLDN11O75508 207 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 KAT7O95251 611 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 FTCDO95954 541 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 KRT7P08729 469 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CD48P09326 243 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 GOT1P17174 413 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 TCP1P17987 556 aaKnown RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 EPHB2P29323 1055 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 HLA-FP30511 346 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 HOXC13P31276 330 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CD70P32970 193 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 ARSEP51690 589 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CDH6P55285 790 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 TPI1P60174 286 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CDH18Q13634 790 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 LRRC38Q5VT99 294 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CXorf57Q6NSI4 855 aaKnown RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 OR52K2Q8NGK3 314 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 FIBINQ8TAL6 211 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 LMLNQ96KR4 655 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 SLC2A11Q9BYW1 496 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 FOXQ1Q9C009 403 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 EPHX3Q9H6B9 360 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
VPS33A-202ENST00000451053 CWC15Q9P013 229 aaKnown RBP13.41□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 ANTXRLA6NF34 631 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 EGFP01133 1207 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 KRT1P04264 644 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 PRLRP16471 622 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 RHOQP17081 205 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 CTNNA2P26232 953 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 CTNNA1P35221 906 aaKnown RBP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 GRIA2P42262 883 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 LMAN2Q12907 356 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 DPYSL3Q14195 570 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 KRT81Q14533 505 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 UBXN2BQ14CS0 331 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 GEN1Q17RS7 908 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 PAPD7Q5XG87 772 aaKnown RBP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 C1orf228Q6PIY5 440 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 RFX8Q6ZV50 586 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 KCTD6Q8NC69 237 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 FAM71BQ8TC56 605 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 TSC1Q92574 1164 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 KRT35Q92764 455 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
VPS33A-202ENST00000451053 NDFIP2Q9NV92 336 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 SNX12Q9UMY4 172 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 SLC27A6Q9Y2P4 619 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
VPS33A-202ENST00000451053 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 PRRT4C9JH25 899 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 H3BRJ5 948 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 STK25O00506 426 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CES2O00748 559 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 ENC1O14682 589 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 APODP05090 189 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 PABPC1P11940 636 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 HTR7P34969 479 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 ARL4AP40617 200 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CSKP41240 450 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 HCAR3P49019 387 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 NUMBP49757 651 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms