RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
SRRT-205ENST00000449389 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 MTG2Q9H4K7 406 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 GAREM1Q9H706 876 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 SYNCQ9H7C4 482 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 NEUROG3Q9Y4Z2 214 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 PCDHB9Q9Y5E1 797 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 CHD6Q8TD26 2715 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 ADAMTS9Q9P2N4 1935 aa11.17□□□□□ -0.62
SRRT-205ENST00000449389 AKAP13Q12802 2813 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 SYNJ2BP-COX16A0A087WUM0 186 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 EDDM13A0A1B0GTR0 161 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 A0A1B0GVM2 712 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TCAF2A6NFQ2 919 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 C1QTNF9BB2RNN3 333 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 FOXN3O00409 490 aaPredicted RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 HYAL3O43820 417 aaPredicted RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 DAB1O75553 588 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 FSBPO95073 299 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TOP3BO95985 862 aaKnown RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 C1QTNF9P0C862 333 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 CD27P26842 260 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 CLCN1P35523 988 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 NNMTP40261 264 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 GRIA4P48058 902 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 FAM193AP78312 1265 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 BNC1Q01954 994 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 SULT2A1Q06520 285 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TRIP6Q15654 476 aaKnown RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 CST6Q15828 149 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 HLA-BQ31612 363 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 DPCR1Q3MIW9 517 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 C9orf64Q5T6V5 341 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 OR6B2Q6IFH4 312 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 OLFML1Q6UWY5 402 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 FAM183BPQ6ZVS7 135 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 ZDHHC17Q8IUH5 632 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 DHX40Q8IX18 779 aaKnown RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 FAM71AQ8IYT1 594 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 CCAR2Q8N163 923 aaKnown RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 BIRC7Q96CA5 298 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 PPP1R9BQ96SB3 815 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 TM9SF3Q9HD45 589 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 FBXL12Q9NXK8 326 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 COX16Q9P0S2 106 aa11.16□□□□□ -0.62
SRRT-205ENST00000449389 AJAP1Q9UKB5 411 aaPredicted RBP11.16□□□□□ -0.62
SRRT-205ENST00000449389 A0A1B0GVT2 93 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 TTC34A8MYJ7 566 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 GRAP2O75791 330 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 ERBB2P04626 1255 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 PDGFRAP16234 1089 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 NOS2P35228 1153 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 CSNK1EP49674 416 aaKnown RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 PLK1P53350 603 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 SLC6A3Q01959 620 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 PTPN20Q4JDL3 420 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 CT47A1Q5JQC4 288 aaPredicted RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 FBXL22Q6P050 247 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 SLC47A2Q86VL8 602 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 TMEM35BQ8NCS4 154 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 ZNF397Q8NF99 534 aaPredicted RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 CAMK1GQ96NX5 476 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 RPRD1AQ96P16 312 aaPredicted RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 NUP62CLQ9H1M0 184 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 IL21RQ9HBE5 538 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 TM7SF3Q9NS93 570 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 RRN3Q9NYV6 651 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 ADAMTS1Q9UHI8 967 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 FZD4Q9ULV1 537 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 FNDC3AQ9Y2H6 1198 aaKnown RBP11.15□□□□□ -0.62
SRRT-205ENST00000449389 MSRB2Q9Y3D2 182 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 PCDHGB2Q9Y5G2 931 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 NUMA1Q14980 2115 aa11.15□□□□□ -0.62
SRRT-205ENST00000449389 A0A1W2PP55 124 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 M0QYT0 321 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 PES1O00541 588 aaKnown RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 MID1O15344 667 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 FLRT2O43155 660 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 CBFA2T3O75081 653 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 RNASEH2AO75792 299 aaKnown RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 ADH1BP00325 375 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 PNMA6AP0CW24 399 aaPredicted RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 EEF1GP26641 437 aaKnown RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 MZF1P28698 734 aaPredicted RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 SLC8A1P32418 973 aa11.14□□□□□ -0.63
SRRT-205ENST00000449389 CDH5P33151 784 aaPredicted RBP11.14□□□□□ -0.63
SRRT-205ENST00000449389 SCNN1AP37088 669 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms