RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PLK2Q9NYY3 685 aa15.05■□□□□ -0
TNF-208ENST00000449264 TBC1D14Q9P2M4 693 aa15.05■□□□□ -0
TNF-208ENST00000449264 NYNRINQ9P2P1 1898 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 SLC9A3R1O14745 358 aaPredicted RBP15.04■□□□□ -0
TNF-208ENST00000449264 MCF2LO15068 1137 aa15.04■□□□□ -0
TNF-208ENST00000449264 PHF2O75151 1096 aa15.04■□□□□ -0
TNF-208ENST00000449264 IFNAR2P48551 515 aa15.04■□□□□ -0
TNF-208ENST00000449264 GRM2Q14416 872 aa15.04■□□□□ -0
TNF-208ENST00000449264 PAFAH1B3Q15102 231 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 C5orf22Q49AR2 442 aa15.04■□□□□ -0
TNF-208ENST00000449264 TTC39BQ5VTQ0 682 aaPredicted RBP15.04■□□□□ -0
TNF-208ENST00000449264 TRIM68Q6AZZ1 485 aa15.04■□□□□ -0
TNF-208ENST00000449264 OTOP3Q7RTS5 596 aa15.04■□□□□ -0
TNF-208ENST00000449264 ZC3H18Q86VM9 953 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 TP53INP2Q8IXH6 220 aa15.04■□□□□ -0
TNF-208ENST00000449264 TTC13Q8NBP0 860 aa15.04■□□□□ -0
TNF-208ENST00000449264 LRRN4Q8WUT4 740 aa15.04■□□□□ -0
TNF-208ENST00000449264 FGF14Q92915 247 aa15.04■□□□□ -0
TNF-208ENST00000449264 MAGOHBQ96A72 148 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 TMA16Q96EY4 203 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
TNF-208ENST00000449264 KRT12Q99456 494 aa15.04■□□□□ -0
TNF-208ENST00000449264 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
TNF-208ENST00000449264 TMEM248Q9NWD8 314 aa15.04■□□□□ -0
TNF-208ENST00000449264 DUS2Q9NX74 493 aaKnown RBP15.04■□□□□ -0
TNF-208ENST00000449264 DTLQ9NZJ0 730 aa15.04■□□□□ -0
TNF-208ENST00000449264 A0A1B0GVM2 712 aa15.03■□□□□ -0
TNF-208ENST00000449264 TCAF2A6NFQ2 919 aa15.03■□□□□ -0
TNF-208ENST00000449264 CCDC188H7C350 402 aa15.03■□□□□ -0
TNF-208ENST00000449264 DFFAO00273 331 aa15.03■□□□□ -0
TNF-208ENST00000449264 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
TNF-208ENST00000449264 CYBBP04839 570 aa15.03■□□□□ -0
TNF-208ENST00000449264 OR1E1P30953 314 aa15.03■□□□□ -0
TNF-208ENST00000449264 NUMBP49757 651 aa15.03■□□□□ -0
TNF-208ENST00000449264 CDH4P55283 916 aa15.03■□□□□ -0
TNF-208ENST00000449264 EIF3EP60228 445 aaKnown RBP15.03■□□□□ -0
TNF-208ENST00000449264 SLC10A2Q12908 348 aaPredicted RBP15.03■□□□□ -0
TNF-208ENST00000449264 NOMO1Q15155 1222 aa15.03■□□□□ -0
TNF-208ENST00000449264 PARM1Q6UWI2 310 aa15.03■□□□□ -0
TNF-208ENST00000449264 VITQ6UXI7 678 aa15.03■□□□□ -0
TNF-208ENST00000449264 B4GALNT4Q76KP1 1039 aa15.03■□□□□ -0
TNF-208ENST00000449264 CARNMT1Q8N4J0 409 aa15.03■□□□□ -0
TNF-208ENST00000449264 OSCP1Q8WVF1 389 aa15.03■□□□□ -0
TNF-208ENST00000449264 ASIC4Q96FT7 647 aa15.03■□□□□ -0
TNF-208ENST00000449264 P2RY11Q96G91 374 aa15.03■□□□□ -0
TNF-208ENST00000449264 CCDC114Q96M63 670 aa15.03■□□□□ -0
TNF-208ENST00000449264 OBP2AQ9NY56 170 aa15.03■□□□□ -0
TNF-208ENST00000449264 DNPEPQ9ULA0 475 aa15.03■□□□□ -0
TNF-208ENST00000449264 WASH4PA8MWX3 477 aa15.03■□□□□ -0
TNF-208ENST00000449264 NEDD8-MDP1E9PL57 170 aa15.03■□□□□ -0
TNF-208ENST00000449264 H7C0C1 242 aa15.03■□□□□ -0
TNF-208ENST00000449264 GFRA2O00451 464 aa15.03■□□□□ -0
TNF-208ENST00000449264 LIASO43766 372 aa15.03■□□□□ -0
TNF-208ENST00000449264 CLDN11O75508 207 aa15.03■□□□□ -0
TNF-208ENST00000449264 ATP5OP48047 213 aa15.03■□□□□ -0
TNF-208ENST00000449264 KCNJ1P48048 391 aa15.03■□□□□ -0
TNF-208ENST00000449264 KCTD19Q17RG1 926 aaPredicted RBP15.03■□□□□ -0
TNF-208ENST00000449264 ANO4Q32M45 955 aa15.03■□□□□ -0
TNF-208ENST00000449264 MPPE1Q53F39 396 aa15.03■□□□□ -0
TNF-208ENST00000449264 TTC27Q6P3X3 843 aa15.03■□□□□ -0
TNF-208ENST00000449264 CCDC137Q6PK04 289 aaKnown RBP15.03■□□□□ -0
TNF-208ENST00000449264 CHST9Q7L1S5 443 aa15.03■□□□□ -0
TNF-208ENST00000449264 ZNF354CQ86Y25 554 aa15.03■□□□□ -0
TNF-208ENST00000449264 TMEM25Q86YD3 366 aa15.03■□□□□ -0
TNF-208ENST00000449264 YAF2Q8IY57 180 aa15.03■□□□□ -0
TNF-208ENST00000449264 C12orf50Q8NA57 414 aaPredicted RBP15.03■□□□□ -0
TNF-208ENST00000449264 NOA1Q8NC60 698 aaKnown RBP15.03■□□□□ -0
TNF-208ENST00000449264 RPGRIP1Q96KN7 1286 aa15.03■□□□□ -0
TNF-208ENST00000449264 C10orf88Q9H8K7 445 aa15.03■□□□□ -0
TNF-208ENST00000449264 ZNF212Q9UDV6 495 aa15.03■□□□□ -0
TNF-208ENST00000449264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 C2CD4DB7Z1M9 353 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 H0Y626 953 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 LUC7L3O95232 432 aaKnown RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 HOXD9P28356 352 aaPredicted RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 NR2C2P49116 596 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 MAPKAPK2P49137 400 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 MRPS25P82663 173 aaKnown RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 ZNF177Q13360 481 aaPredicted RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 CDH18Q13634 790 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 BYSLQ13895 437 aaKnown RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 CCNG2Q16589 344 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 CYP1B1Q16678 543 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 LY6G5CQ5SRR4 150 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 MTSS1LQ765P7 747 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 MFN1Q8IWA4 741 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 CCDC105Q8IYK2 499 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 LZTR1Q8N653 840 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 MAFAQ8NHW3 353 aaPredicted RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 IRF7Q92985 503 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 E2F7Q96AV8 911 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 ELSPBP1Q96BH3 223 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 OTUB2Q96DC9 234 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 OLFM3Q96PB7 478 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 BBS2Q9BXC9 721 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 PLA2G2FQ9BZM2 168 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 KLC2Q9H0B6 622 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 EBF3Q9H4W6 596 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 SPHK2Q9NRA0 654 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 HOMER3Q9NSC5 361 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms