RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CES3Q6UWW8 571 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 PDZD4Q76G19 769 aaPredicted RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 OR52K1Q8NGK4 314 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 DNAJC9Q8WXX5 260 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 PARK7Q99497 189 aaKnown RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 C1orf21Q9H246 121 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 LRRC40Q9H9A6 602 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 IL1RAPL1Q9NZN1 696 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 KLHL8Q9P2G9 620 aaPredicted RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 STX18Q9P2W9 335 aaKnown RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 FBXW11Q9UKB1 542 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 ADAM28Q9UKQ2 775 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 YJEFN3A6XGL0 299 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 F8W8V4 182 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 NCAM2O15394 837 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 TM7SF2O76062 418 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 AMHP03971 560 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 KDSRQ06136 332 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 SLC34A1Q06495 639 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 OLIG2Q13516 323 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 RCN2Q14257 317 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 CCDC6Q16204 474 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 TSNAXIP1Q2TAA8 658 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 DNAL1Q4LDG9 190 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 PPM1JQ5JR12 505 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 ATG14Q6ZNE5 492 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 TMEM135Q86UB9 458 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 NRG4Q8WWG1 115 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 PGAP3Q96FM1 320 aaPredicted RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 ZFP42Q96MM3 310 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 SORT1Q99523 831 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 NMRK1Q9NWW6 199 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 TMEM216Q9P0N5 145 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 TXNDC16Q9P2K2 825 aa17.35■□□□□ 0.37
TOM1-210ENST00000449058 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.35■□□□□ 0.37
TOM1-210ENST00000449058 NVLO15381 856 aaKnown RBP17.34■□□□□ 0.37
TOM1-210ENST00000449058 TBX10O75333 385 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 ZNF865P0CJ78 1059 aaPredicted RBP17.34■□□□□ 0.37
TOM1-210ENST00000449058 TYK2P29597 1187 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 CDC25CP30307 473 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 GARSP41250 739 aaKnown RBP17.34■□□□□ 0.37
TOM1-210ENST00000449058 UBAP2LQ14157 1087 aaKnown RBP17.34■□□□□ 0.37
TOM1-210ENST00000449058 RAB41Q5JT25 222 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 KCTD11Q693B1 232 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 C10orf107Q8IVU9 208 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 OR6Y1Q8NGX8 325 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 RBBP8Q99708 897 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 SMOQ99835 787 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 CASS4Q9NQ75 786 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 DDX43Q9NXZ2 648 aaKnown RBP17.34■□□□□ 0.37
TOM1-210ENST00000449058 COPG2Q9UBF2 871 aa17.34■□□□□ 0.37
TOM1-210ENST00000449058 CAPN9O14815 690 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 SMNDC1O75940 238 aaKnown RBP eCLIP17.33■□□□□ 0.37
TOM1-210ENST00000449058 ALOX15P16050 662 aaPredicted RBP17.33■□□□□ 0.37
TOM1-210ENST00000449058 THOC5Q13769 683 aaKnown RBP17.33■□□□□ 0.37
TOM1-210ENST00000449058 SNX30Q5VWJ9 437 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 TWF2Q6IBS0 349 aaKnown RBP17.33■□□□□ 0.37
TOM1-210ENST00000449058 NET1Q7Z628 596 aaPredicted RBP17.33■□□□□ 0.37
TOM1-210ENST00000449058 SCUBE1Q8IWY4 988 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 NPWQ8N729 165 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 ADAM32Q8TC27 787 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 STMN2Q93045 179 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 SENP8Q96LD8 212 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 FAM161BQ96MY7 647 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 PTPN18Q99952 460 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 BRD8Q9H0E9 1235 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 CNGB3Q9NQW8 809 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 SNX15Q9NRS6 342 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 VANGL2Q9ULK5 521 aa17.33■□□□□ 0.37
TOM1-210ENST00000449058 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 ZCWPW2A0A1B0GU75 182 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 CYP2B6P20813 491 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 ARRB2P32121 409 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 HARS2P49590 506 aaKnown RBP17.33■□□□□ 0.36
TOM1-210ENST00000449058 SESN3P58005 492 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 TPI1P60174 286 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 INTS6LQ5JSJ4 861 aaKnown RBP17.33■□□□□ 0.36
TOM1-210ENST00000449058 MORN1Q5T089 497 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 TRIM68Q6AZZ1 485 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 GPRIN1Q7Z2K8 1008 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 MAVSQ7Z434 540 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 FAM35AQ86V20 835 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 95.3
TOM1-210ENST00000449058 ZMIZ2Q8NF64 920 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 PGLYRP2Q96PD5 576 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 FAM167BQ9BTA0 163 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
TOM1-210ENST00000449058 TMEM30AQ9NV96 361 aa17.33■□□□□ 0.36
TOM1-210ENST00000449058 COL4A4P53420 1690 aaPredicted RBP17.33■□□□□ 0.36
TOM1-210ENST00000449058 ERI2A8K979 691 aaKnown RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 ZBTB24O43167 697 aaPredicted RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 USP12O75317 370 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 AP1G2O75843 785 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 USP1O94782 785 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 HOXC8P31273 242 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 CD68P34810 354 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms