RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 TPRP12270 2363 aaKnown RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 PCDH15Q96QU1 1955 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 A0A1B0GVM2 712 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 TCAF2A6NFQ2 919 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 PMLP29590 882 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 MATKP42679 507 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 LRSAM1Q6UWE0 723 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 DHX40Q8IX18 779 aaKnown RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 CCAR2Q8N163 923 aaKnown RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 ZCCHC9Q8N567 271 aaKnown RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 GPT2Q8TD30 523 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 PRMT1Q99873 361 aaKnown RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 NAA15Q9BXJ9 866 aaKnown RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 ZDHHC5Q9C0B5 715 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 RSPH9Q9H1X1 276 aaPredicted RBP20.33■□□□□ 0.85
VCP-203ENST00000448530 MTG2Q9H4K7 406 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.33■□□□□ 0.85
VCP-203ENST00000448530 SCML1Q9UN30 329 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 PAXBP1Q9Y5B6 917 aa20.33■□□□□ 0.85
VCP-203ENST00000448530 CACNA1EQ15878 2313 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 ACACBO00763 2458 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 TARSL2A2RTX5 802 aaKnown RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 F8VZ95 297 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 BCAT2O15382 392 aaPredicted RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 SIN3BO75182 1162 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 SEMA4FO95754 770 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 LSM8O95777 96 aaKnown RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 ACSL1P33121 698 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 CDH5P33151 784 aaPredicted RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 SULT2A1Q06520 285 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 FAM102AQ5T9C2 384 aaPredicted RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 CDKAL1Q5VV42 579 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 FBXL22Q6P050 247 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 CIR1Q86X95 450 aaPredicted RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 APCDD1Q8J025 514 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 MYO19Q96H55 970 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 MRGPRX3Q96LB0 322 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 ANO10Q9NW15 660 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 TMEM51Q9NW97 253 aa20.32■□□□□ 0.84
VCP-203ENST00000448530 EIF2B4Q9UI10 523 aaKnown RBP20.32■□□□□ 0.84
VCP-203ENST00000448530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 EDDM13A0A1B0GTR0 161 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 F9P00740 461 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 C7P10643 843 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 PDGFRAP16234 1089 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 SCNN1AP37088 669 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 CTSOP43234 321 aaPredicted RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 SULT1E1P49888 294 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 SEMA3BQ13214 749 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 ZNF177Q13360 481 aaPredicted RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 AUHQ13825 339 aaKnown RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 ARID5BQ14865 1188 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 NUMA1Q14980 2115 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 KRT31Q15323 416 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 RBM43Q6ZSC3 357 aaKnown RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 OR2I1PQ8NGU4 316 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 RPL10LQ96L21 214 aaKnown RBP20.31■□□□□ 0.84
VCP-203ENST00000448530 SIK2Q9H0K1 926 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 WDCPQ9H6R7 721 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 SGK2Q9HBY8 427 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 VANGL2Q9ULK5 521 aa20.31■□□□□ 0.84
VCP-203ENST00000448530 TTC34A8MYJ7 566 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 UPK3BL1B0FP48 263 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 UPK3BL2E5RIL1 263 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 PAGE1O75459 146 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 GABRB2P47870 512 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 CENPCQ03188 943 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 DEUP1Q05D60 604 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 GRIK2Q13002 908 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 BRMS1LQ5PSV4 323 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 USP30Q70CQ3 517 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 NOP9Q86U38 636 aaKnown RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 PCMTD1Q96MG8 357 aaPredicted RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 NPY6RQ99463 290 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 PABPC3Q9H361 631 aaKnown RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 C6orf106Q9H6K1 298 aaPredicted RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 FAM207AQ9NSI2 230 aaPredicted RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 PIGVQ9NUD9 493 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 DNAAF2Q9NVR5 837 aaKnown RBP20.3■□□□□ 0.84
VCP-203ENST00000448530 FANCLQ9NW38 375 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 FBXL12Q9NXK8 326 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 SLCO3A1Q9UIG8 710 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 HS3ST4Q9Y661 456 aa20.3■□□□□ 0.84
VCP-203ENST00000448530 ITIH6Q6UXX5 1313 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 FAM170AA1A519 330 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 GOLGA8SH3BPF8 625 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 CLDN11O75508 207 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 GFPT2O94808 682 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 FSBPO95073 299 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 MMEP08473 750 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 PLK1P53350 603 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 POLR2FP61218 127 aaKnown RBP20.29■□□□□ 0.84
VCP-203ENST00000448530 SHC2P98077 582 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 FOXC1Q12948 553 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 SLC14A1Q13336 389 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 CST6Q15828 149 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 STX1AQ16623 288 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 C9orf64Q5T6V5 341 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 NAA35Q5VZE5 725 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms