RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 MAP7D1Q3KQU3 841 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 PLEKHG6Q3KR16 790 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 USP39Q53GS9 565 aaKnown RBP20.27■□□□□ 0.84
NELFE-206ENST00000444811 ALFQ53S48 1182 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 PPP1R2P3Q6NXS1 205 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 ERMP1Q7Z2K6 904 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 CCDC117Q8IWD4 279 aaPredicted RBP20.27■□□□□ 0.84
NELFE-206ENST00000444811 APCDD1Q8J025 514 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 FRMD1Q8N878 549 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 RLN3Q8WXF3 142 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 ZC3H10Q96K80 434 aaKnown RBP20.27■□□□□ 0.84
NELFE-206ENST00000444811 MRGPRX3Q96LB0 322 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 MRGPRX1Q96LB2 322 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 C1orf74Q96LT6 269 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 MCEEQ96PE7 176 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 HAPLN3Q96S86 360 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 DUSP15Q9H1R2 295 aaPredicted RBP20.27■□□□□ 0.84
NELFE-206ENST00000444811 NCDNQ9UBB6 729 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 PLXND1Q9Y4D7 1925 aa20.27■□□□□ 0.84
NELFE-206ENST00000444811 NCOR2Q9Y618 2525 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 IGLV3-10A0A075B6K4 115 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 DRGXA6NNA5 263 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 CCP110O43303 1012 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 ATMINO43313 823 aaPredicted RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 CBFA2T2O43439 604 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 FTLP02792 175 aaPredicted RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 ATP5BP06576 529 aaKnown RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 TPM3P06753 285 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 MZF1P28698 734 aaPredicted RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 CASP14P31944 242 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 COPAP53621 1224 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 OGDHQ02218 1023 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 FNDC3BQ53EP0 1204 aaKnown RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 PLEKHA7Q6IQ23 1121 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 SERPINA13PQ6UXR4 307 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 PGBD3Q8N328 593 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 ZNF366Q8N895 744 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 FAM172AQ8WUF8 416 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 PLA2G4CQ9UP65 541 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 LUC7L2Q9Y383 392 aaKnown RBP20.26■□□□□ 0.83
NELFE-206ENST00000444811 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■■□ 25.7
NELFE-206ENST00000444811 SPAG17Q6Q759 2223 aa20.26■□□□□ 0.83
NELFE-206ENST00000444811 E9PAM4 449 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 ASLP04424 464 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 SERPING1P05155 500 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 EPHX1P07099 455 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 TGM1P22735 817 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 ADRA1BP35368 520 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 CTSOP43234 321 aaPredicted RBP20.25■□□□□ 0.83
NELFE-206ENST00000444811 ZNF143P52747 638 aaPredicted RBP20.25■□□□□ 0.83
NELFE-206ENST00000444811 PLK1P53350 603 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 CDH4P55283 916 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 MAMLD1Q13495 774 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 SLC12A1Q13621 1099 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 STARD3Q14849 445 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 TDRD12Q587J7 1177 aaKnown RBP20.25■□□□□ 0.83
NELFE-206ENST00000444811 CCDC185Q8N715 623 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 ALG14Q96F25 216 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 MKRN2Q9H000 416 aaKnown RBP20.25■□□□□ 0.83
NELFE-206ENST00000444811 ISCUQ9H1K1 167 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 CD93Q9NPY3 652 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 MBD1Q9UIS9 605 aaPredicted RBP20.25■□□□□ 0.83
NELFE-206ENST00000444811 GMEB2Q9UKD1 530 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 OR51B4Q9Y5P0 310 aa20.25■□□□□ 0.83
NELFE-206ENST00000444811 AP5Z1O43299 807 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 RTN2O75298 545 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 CLDN11O75508 207 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 RETP07949 1114 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 NUMBP49757 651 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 CAMK2GQ13555 558 aaPredicted RBP20.24■□□□□ 0.83
NELFE-206ENST00000444811 ACBD5Q5T8D3 534 aaPredicted RBP20.24■□□□□ 0.83
NELFE-206ENST00000444811 PMS2CLQ68D20 193 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 VSTM4Q8IW00 320 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 HINFPQ9BQA5 517 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 PARD6AQ9NPB6 346 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 MPP6Q9NZW5 540 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 ZNF212Q9UDV6 495 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 ADAMTS1Q9UHI8 967 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 ERVW-1Q9UQF0 538 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 TBC1D30Q9Y2I9 924 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 BZW2Q9Y6E2 419 aaKnown RBP20.24■□□□□ 0.83
NELFE-206ENST00000444811 ABCA7Q8IZY2 2146 aa20.24■□□□□ 0.83
NELFE-206ENST00000444811 DOCK4Q8N1I0 1966 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.23■□□□□ 0.83
NELFE-206ENST00000444811 SYNCRIPO60506 623 aaKnown RBP20.23■□□□□ 0.83
NELFE-206ENST00000444811 EPN2O95208 641 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 MOCS3O95396 460 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 HNRNPH3P31942 346 aaKnown RBP20.23■□□□□ 0.83
NELFE-206ENST00000444811 NRG1Q02297 640 aaPredicted RBP20.23■□□□□ 0.83
NELFE-206ENST00000444811 ZNF177Q13360 481 aaPredicted RBP20.23■□□□□ 0.83
NELFE-206ENST00000444811 MANEALQ5VSG8 457 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 SPECC1LQ69YQ0 1117 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 DCUN1D2Q6PH85 259 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 NTAN1Q96AB6 310 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 RMDN1Q96DB5 314 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 LOXL4Q96JB6 756 aa20.23■□□□□ 0.83
NELFE-206ENST00000444811 CNPY3Q9BT09 278 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms