RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ITGALP20701 1170 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 NDUFV1P49821 464 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 CERCAMQ5T4B2 595 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 PACS2Q86VP3 889 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 FNDC5Q8NAU1 212 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 OXNAD1Q96HP4 312 aaPredicted RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 POPDC2Q9HBU9 364 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SLC17A7Q9P2U7 560 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 SEC22BO75396 215 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SPAG6O75602 509 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 PIGNO95427 931 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 KRT16P08779 473 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 MUTP22033 750 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 KPNA1P52294 538 aaPredicted RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 GTF2BQ00403 316 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 CCDC142Q17RM4 750 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 TMEM63BQ5T3F8 832 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 TIGD7Q6NT04 549 aaPredicted RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 HEATR4Q86WZ0 1026 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SIX5Q8N196 739 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 KCTD14Q9BQ13 255 aaPredicted RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 SPATA16Q9BXB7 569 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 ZNF518BQ9C0D4 1074 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 CYP3A43Q9HB55 503 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 UBDO15205 165 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 GSTM1P09488 218 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 PRKAR2AP13861 404 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 HNRNPLP14866 589 aaKnown RBP eCLIP8.16□□□□□ -1.11e-8■■■■□ 26.6
RIF1-205ENST00000444746 VHLP40337 213 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 VAC14Q08AM6 782 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 TARBP2Q15633 366 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 RUBCNQ92622 972 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 NSMCE4AQ9NXX6 385 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 LSM8O95777 96 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 PGAM1P18669 254 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SEMA5AQ13591 1074 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 MAPRE1Q15691 268 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 TBCELQ5QJ74 424 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 FAM180AQ6UWF9 173 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 LINGO4Q6UY18 593 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 SUGP1Q8IWZ8 645 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 PCSK9Q8NBP7 692 aaKnown RBP8.16□□□□□ -1.1
RIF1-205ENST00000444746 CLEC4CQ8WTT0 213 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 CDRT15Q96T59 188 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 NCKIPSDQ9NZQ3 722 aa8.16□□□□□ -1.1
RIF1-205ENST00000444746 ZNF839A8K0R7 811 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 TREHO43280 583 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 PROCP04070 461 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CFHP08603 1231 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 RPL17P18621 184 aaKnown RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 DSG1Q02413 1049 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 NRF1Q16656 503 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 ZNF284Q2VY69 593 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 DEPDC1Q5TB30 811 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 RFWD3Q6PCD5 774 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 DCBLD1Q8N8Z6 715 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 ZNHIT2Q9UHR6 403 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 TBC1D12O60347 775 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 NOMO3P69849 1222 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 ATAD1Q8NBU5 361 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 UBE2OQ9C0C9 1292 aaKnown RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 DMAP1Q9NPF5 467 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 PNPOQ9NVS9 261 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 MAP10Q9P2G4 905 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CYP1A2P05177 515 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 PRKAG1P54619 331 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 GCNT1Q02742 428 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 FASTKD3Q14CZ7 662 aaKnown RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 PFKFB4Q16877 469 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 LRRC73Q5JTD7 316 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 ARHGAP17Q68EM7 881 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CD302Q8IX05 232 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 TMEM192Q8IY95 271 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 RIBC1Q8N443 379 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 AZIN2Q96A70 460 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 PLEKHA8Q96JA3 519 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CXorf56Q9H5V9 222 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CD84Q9UIB8 345 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 CXCL11O14625 94 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 MLNP12872 115 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 MSH3P20585 1137 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 HIST2H2ACQ16777 129 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 HIST2H2AA3Q6FI13 130 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 LRP10Q7Z4F1 713 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 GTF3C2Q8WUA4 911 aaPredicted RBP8.15□□□□□ -1.1
RIF1-205ENST00000444746 SPOCK2Q92563 424 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 MKL1Q969V6 931 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 DCUN1D5Q9BTE7 237 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 PRDM12Q9H4Q4 367 aa8.15□□□□□ -1.1
RIF1-205ENST00000444746 SLC17A6Q9P2U8 582 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms