RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TTC39BQ5VTQ0 682 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TPGS1Q6ZTW0 290 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 C12orf50Q8NA57 414 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 MPP4Q96JB8 637 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 B3GALT6Q96L58 329 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 SHCBP1LQ9BZQ2 653 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TKTL2Q9H0I9 626 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TLR8Q9NR97 1041 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 HACD3Q9P035 362 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 LAMB2P55268 1798 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 LIN7AO14910 233 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TLL1O43897 1013 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 PIGRP01833 764 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ITGAVP06756 1048 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 CALB2P22676 271 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 IL1R2P27930 398 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ASPAP45381 313 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TBX4P57082 545 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 STX3Q13277 289 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 FASTKD1Q53R41 847 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 RAB44Q7Z6P3 723 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 WDR60Q8WVS4 1066 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 RNF186Q9NXI6 227 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 APOBEC2Q9Y235 224 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TRDMT1O14717 391 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ATP5HO75947 161 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 FBXO21O94952 628 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 SLC2A3P11169 496 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ATP6V1C1P21283 382 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 MYBPC3Q14896 1274 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 SLC26A11Q86WA9 606 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 E2F7Q96AV8 911 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ZIC5Q96T25 663 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 FTHL17Q9BXU8 183 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 RNPEPL1Q9HAU8 725 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 CDY1Q9Y6F8 540 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 EDN1P05305 212 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 RIPK1Q13546 671 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 KLC3Q6P597 504 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 C7orf61Q8IZ16 206 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 PIP4K2CQ8TBX8 421 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 FBXO44Q9H4M3 255 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 MRPL17Q9NRX2 175 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 SMAPO00193 183 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ATG7O95352 703 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 NFKBIAP25963 317 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 POLNQ7Z5Q5 900 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 STK32AQ8WU08 396 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 C20orf96Q9NUD7 363 aaPredicted RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 NKX1-2Q9UD57 310 aaPredicted RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 GIT1Q9Y2X7 761 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 COL1A2P08123 1366 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 MAGEA13PA6NCF6 341 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 SPECC1L-ADORA2AF8WAN1 911 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ALOX15BO15296 676 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 SPAG6O75602 509 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 SLC10A3P09131 477 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 FUT4P22083 530 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 AKT1P31749 480 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 VHLP40337 213 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ABCG1P45844 678 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 GAD2Q05329 585 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 SCARA3Q6AZY7 606 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 C16orf59Q7L2K0 433 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ZNF75CPQ92670 426 aaPredicted RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 PTPN18Q99952 460 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CORO1BQ9BR76 489 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 FRMD8P1Q9BZ68 369 aaPredicted RBP10.83□□□□□ -0.68
TOP3B-210ENST00000444502 GPR63Q9BZJ6 419 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 UNC93B1Q9H1C4 597 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 PPCSQ9HAB8 311 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CLIC5Q9NZA1 410 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 MORF4L1Q9UBU8 362 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CNTRLQ7Z7A1 2325 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 ARL5CA6NH57 179 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 PPEF2O14830 753 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 CBX6O95503 412 aa10.83□□□□□ -0.68
TOP3B-210ENST00000444502 TPH1P17752 444 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms