RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 OMDQ99983 421 aa13.46□□□□□ -0.26
SLC48A1-201ENST00000442218 COG4Q9H9E3 785 aa13.46□□□□□ -0.26
SLC48A1-201ENST00000442218 DNAJC25-GNG10A0A024R161 153 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 TMEM233B4DJY2 109 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PRKCGP05129 697 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 NUDT2P50583 147 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 RAP1GDS1P52306 607 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 NET1Q7Z628 596 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 STRA8Q7Z7C7 330 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SATL1Q86VE3 508 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ARNTL2Q8WYA1 636 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 FAM167AQ96KS9 214 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 NUF2Q9BZD4 464 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SMARCAD1Q9H4L7 1026 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 KLHL8Q9P2G9 620 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 CDH22Q9UJ99 828 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 BCLAF3A2AJT9 711 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SPAG6O75602 509 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 IL18RAPO95256 599 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 TGFB3P10600 412 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 TGM2P21980 687 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 TKTP29401 623 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SOX11P35716 441 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 CCNFP41002 786 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 GRIA2P42262 883 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 MRPS22P82650 360 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PDK2Q15119 407 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 TRMT5Q32P41 509 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ZSCAN18Q8TBC5 510 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 LENG8Q96PV6 779 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 S100A14Q9HCY8 104 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SNX15Q9NRS6 342 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 APPL1Q9UKG1 709 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 MEIS3P2A8K0S8 358 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 NDC80O14777 642 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SPTLC1O15269 473 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PEX1O43933 1283 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 MAGEC1O60732 1142 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 AFF1P51825 1210 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 ERAP1Q9NZ08 941 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 SLC39A10Q9ULF5 831 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 POMPQ9Y244 141 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 PPME1Q9Y570 386 aa13.45□□□□□ -0.26
SLC48A1-201ENST00000442218 H3BRB1 525 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TSPAN1O60635 241 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 ENO3P13929 434 aaPredicted RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 ITGAXP20702 1163 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 GRM1Q13255 1194 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 MMEL1Q495T6 779 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 SLC35F5Q8WV83 523 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 CATSPER2Q96P56 530 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 FRMD8P1Q9BZ68 369 aaPredicted RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TUT1Q9H6E5 874 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 A0A1B0GTW7 788 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 M0QYT0 321 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TRDMT1O14717 391 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 KLF11O14901 512 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 BUD23O43709 281 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TRPA1O75762 1119 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 FESP07332 822 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 CPA3P15088 417 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 ARL4AP40617 200 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 LBRQ14739 615 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 FBXL19Q6PCT2 694 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 IYDQ6PHW0 289 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 TMEM40Q8WWA1 233 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 SH3GL3Q99963 347 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 COPG2Q9UBF2 871 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 LRRC37A2A6NM11 1700 aa13.44□□□□□ -0.26
SLC48A1-201ENST00000442218 HBP1O60381 514 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 CNPY1Q3B7I2 92 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms