RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 RNF139Q8WU17 664 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 USP28Q96RU2 1077 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 ULBP1Q9BZM6 244 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
SYN3-204ENST00000441821 ERVW-1Q9UQF0 538 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 DMTF1Q9Y222 760 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 SPTA1P02549 2419 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 ITIH6Q6UXX5 1313 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 ARID1BQ8NFD5 2236 aaPredicted RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 CSO75390 466 aaKnown RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 GP1BAP07359 652 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 DGKAP23743 735 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 CASP1P29466 404 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 PSMD8P48556 350 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 SLC11A2P49281 568 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 NASPP49321 788 aaPredicted RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 SKOR1P84550 965 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 STAT4Q14765 748 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 KMT5BQ4FZB7 885 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 FAM133BQ5BKY9 247 aaKnown RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 KIAA1614Q5VZ46 1190 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 BSPRYQ5W0U4 402 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 ARHGAP17Q68EM7 881 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 RFWD3Q6PCD5 774 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 PRICKLE2Q7Z3G6 844 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 TTC39CQ8N584 583 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 TAS1R2Q8TE23 839 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 NDRG1Q92597 394 aaKnown RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 FAM131CQ96AQ9 280 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 CCDC97Q96F63 343 aaPredicted RBP10.36□□□□□ -0.75
SYN3-204ENST00000441821 VCPIP1Q96JH7 1222 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 ABCC13Q9NSE7 274 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 CYTH4Q9UIA0 394 aa10.36□□□□□ -0.75
SYN3-204ENST00000441821 GOLGA6L7A0A1B0GV03 622 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 A0A1B0GVM2 712 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 TTC34A8MYJ7 566 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 PRAMEF26H0Y7S4 382 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 XPO1O14980 1071 aaKnown RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 SLC7A4O43246 635 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 MSI1O43347 362 aaKnown RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 ACSL4O60488 711 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 IL1BP01584 269 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 IGLV3-27P01718 113 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 NR3C1P04150 777 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 MZF1P28698 734 aaPredicted RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 SLC6A4P31645 630 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 DRD3P35462 400 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 NUCB2P80303 420 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 ECT2LQ008S8 904 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 ELAVL3Q14576 367 aaKnown RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 PITRM1Q5JRX3 1037 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 NUGGCQ68CJ6 796 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 TRIM69Q86WT6 500 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 STK40Q8N2I9 435 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 HJURPQ8NCD3 748 aaPredicted RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 LINC00301Q8NCQ3 95 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 EDEM1Q92611 657 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 PTPRN2Q92932 1015 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 GRAMD1AQ96CP6 724 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 KLHDC7BQ96G42 594 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 FAXDC2Q96IV6 333 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 SLC46A1Q96NT5 459 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 FAM117AQ9C073 453 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 ABCG4Q9H172 646 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 BLZF1Q9H2G9 400 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 KCTD10Q9H3F6 313 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 LRRC4Q9HBW1 653 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 STIM2Q9P246 746 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 SLCO3A1Q9UIG8 710 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
SYN3-204ENST00000441821 HEMK1Q9Y5R4 338 aaPredicted RBP10.35□□□□□ -0.75
SYN3-204ENST00000441821 TYW5A2RUC4 315 aaKnown RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 YJEFN3A6XGL0 299 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 E7ENQ6 273 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 TULP2O00295 520 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 PDXKO00764 312 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 MAPK13O15264 365 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 PLRG1O43660 514 aaKnown RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 RNGTTO60942 597 aaKnown RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 PPP6R2O75170 966 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 MOCS3O95396 460 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 GIMD1P0DJR0 217 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 ALPPL2P10696 532 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 KRT10P13645 584 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 SYT1P21579 422 aa10.34□□□□□ -0.75
SYN3-204ENST00000441821 RBMS1P29558 406 aaKnown RBP10.34□□□□□ -0.75
SYN3-204ENST00000441821 MAT2AP31153 395 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms