RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PIWIL3Q7Z3Z3 882 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 CPXCR1Q8N123 301 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 CLIP4Q8N3C7 705 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TMEM130Q8N3G9 435 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 CCNYL1Q8N7R7 359 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 UBR7Q8N806 425 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF516Q92618 1163 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 PPP1R14BQ96C90 147 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SGF29Q96ES7 293 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 FBXL20Q96IG2 436 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SLC39A3Q9BRY0 314 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 CAB39LQ9H9S4 337 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 PPCSQ9HAB8 311 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 STK39Q9UEW8 545 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 MAFFQ9ULX9 164 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 POLIQ9UNA4 740 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SLC27A5Q9Y2P5 690 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 HES2Q9Y543 173 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 NOX1Q9Y5S8 564 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 WDR27A2RRH5 827 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 B4GAT1O43505 415 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 NDUFB10O96000 172 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 MSL3P1P0C860 447 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SNHG28P0DPA3 235 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 DPP6P42658 865 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 PMS2P3Q13401 168 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 PTK2BQ14289 1009 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZBTB41Q5SVQ8 909 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ANGEL2Q5VTE6 544 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 MBLAC2Q68D91 279 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 GK5Q6ZS86 529 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SH2D5Q6ZV89 423 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 GPR180Q86V85 440 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 TDRD5Q8NAT2 981 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ADCY4Q8NFM4 1077 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 NKD2Q969F2 451 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZBTB45Q96K62 511 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 RANBP9Q96S59 729 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 EIF2AQ9BY44 585 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 MIR1-1HGQ9H1L0 117 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 APOBEC3GQ9HC16 384 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ATAD3AQ9NVI7 634 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SEPT10Q9P0V9 454 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF229Q9UJW7 825 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 DRG1Q9Y295 367 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 AP4S1Q9Y587 144 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 PSAT1Q9Y617 370 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZHX2Q9Y6X8 837 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 TMEM191CA6NGB0 347 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 H3BNH8 94 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 TBX3O15119 743 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 AP1G1O43747 822 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SNNO75324 88 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 PSMD10O75832 226 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 VAPBO95292 243 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SERPINE1P05121 402 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 MZF1P28698 734 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 GNL1P36915 607 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 NR4A2P43354 598 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 LIG4P49917 911 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 GPC3P51654 580 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 RAD23AP54725 363 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 CYP24A1Q07973 514 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 EIF2B5Q13144 721 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 IKBKEQ14164 716 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 KCNJ8Q15842 424 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 UGCGQ16739 394 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZIK1Q3SY52 487 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 IFNEQ86WN2 208 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SIX6OS1Q8N1H7 587 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SPATA6LQ8N4H0 392 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 KIAA1958Q8N8K9 716 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SCAIQ8N9R8 606 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 CATSPER1Q8NEC5 780 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 PDZD8Q8NEN9 1154 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 KBTBD7Q8WVZ9 684 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF606Q8WXB4 792 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 VCPIP1Q96JH7 1222 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 SNX27Q96L92 541 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 NSMCE3Q96MG7 304 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 WDR11Q9BZH6 1224 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 CLK4Q9HAZ1 481 aaKnown RBP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDAC9-214ENST00000441542 MRGBPQ9NV56 204 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 TEX264Q9Y6I9 313 aa7.7□□□□□ -1.18
HDAC9-214ENST00000441542 IGLV3-22A0A075B6J6 115 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 ERVK-10P10266 1014 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 JAK1P23458 1154 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 ABCE1P61221 599 aaKnown RBP7.69□□□□□ -1.18
HDAC9-214ENST00000441542 OSTNP61366 133 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 PRPSAP1Q14558 356 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 PTPN20Q4JDL3 420 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 USP37Q86T82 979 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
HDAC9-214ENST00000441542 HERC6Q8IVU3 1022 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms