RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TPK1Q9H3S4 243 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 CST8O60676 142 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 CDKN2BP42772 138 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 IREB2P48200 963 aaKnown RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 GPC3P51654 580 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 NIPAL1Q6NVV3 410 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 TBC1D15Q8TC07 691 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 ITPKCQ96DU7 683 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 COQ10BQ9H8M1 238 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 SCINQ9Y6U3 715 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 PLOD2O00469 737 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 RCVRNP35243 200 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 NR1D2Q14995 579 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 LGSNQ5TDP6 509 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 PLEKHA7Q6IQ23 1121 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 DNERQ8NFT8 737 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 LENG8Q96PV6 779 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 MSTO1Q9BUK6 570 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 INO80BQ9C086 356 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 IP6K2Q9UHH9 426 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 RNASEH2AO75792 299 aaKnown RBP17.18■□□□□ 0.34
PMS1-213ENST00000441310 ACAT1P24752 427 aaKnown RBP17.18■□□□□ 0.34
PMS1-213ENST00000441310 RAB15P59190 212 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 OSTNP61366 133 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 DMPKQ09013 629 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 ITGADQ13349 1161 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 CCDC153Q494R4 210 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 MCEEQ96PE7 176 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 SERPINI1Q99574 410 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 PORCNQ9H237 461 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 SMYD2Q9NRG4 433 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 OLAHQ9NV23 265 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 TTLL3Q9Y4R7 772 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 MAPK10P53779 464 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 KLF10Q13118 480 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 FGD3Q5JSP0 725 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 KCNT1Q5JUK3 1230 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 RWDD4Q6NW29 188 aaKnown RBP17.18■□□□□ 0.34
PMS1-213ENST00000441310 ADGRF2Q8IZF7 708 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 FAM156AQ8NDB6 213 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 DHX33Q9H6R0 707 aaKnown RBP17.18■□□□□ 0.34
PMS1-213ENST00000441310 SACM1LQ9NTJ5 587 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 CNTNAP2Q9UHC6 1331 aa17.18■□□□□ 0.34
PMS1-213ENST00000441310 ENO3P13929 434 aaPredicted RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 MGAT5BQ3V5L5 792 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 DEPDC1Q5TB30 811 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZFP1Q6P2D0 407 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 OR5B17Q8NGF7 314 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 PPP1R36Q96LQ0 422 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 KLHL32Q96NJ5 620 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 VPS51Q9UID3 782 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 STX16-NPEPL1H3BU86 382 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 PIK3R2O00459 728 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 STAM2O75886 525 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CSH1P0DML2 217 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CSH2P0DML3 217 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CYP2C8P10632 490 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZNF26P17031 533 aaPredicted RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 TNFSF9P41273 254 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZNF252P-AS1Q0IIN9 211 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CAPSQ13938 189 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 GPR107Q5VW38 600 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 TMC2Q8TDI7 906 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CHPT1Q8WUD6 406 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 CDCA5Q96FF9 252 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZMAT2Q96NC0 199 aaKnown RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 SOBPA7XYQ1 873 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 KDM1AO60341 852 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZC3H11AO75152 810 aaKnown RBP eCLIP17.17■□□□□ 0.34
PMS1-213ENST00000441310 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 BMXP51813 675 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 EIF3EP60228 445 aaKnown RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 NOMO3P69849 1222 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 MBLAC2Q68D91 279 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 BNC2Q6ZN30 1099 aaPredicted RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 ARCQ7LC44 396 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 SETD3Q86TU7 594 aaPredicted RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 RTKNQ9BST9 563 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 VPS45Q9NRW7 570 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 GIN1Q9NXP7 522 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms