RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 C1orf74Q96LT6 269 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 GABRG3Q99928 467 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 PACSIN1Q9BY11 444 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 TPSD1Q9BZJ3 242 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 SPTLC3Q9NUV7 552 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 MPP6Q9NZW5 540 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 A0A1W2PQF6 199 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 SRGAP2O75044 1071 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 PRKCHP24723 683 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 DGKEP52429 567 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 GALCP54803 685 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 FNDC3BQ53EP0 1204 aaKnown RBP18.58■□□□□ 0.56
CPSF4-205ENST00000440514 SDE2Q6IQ49 451 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 KIAA1211LQ6NV74 962 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 LRRC31Q6UY01 552 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 TFAP2DQ7Z6R9 452 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 WDR5BQ86VZ2 330 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 APCDD1Q8J025 514 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 NTAN1Q96AB6 310 aa18.58■□□□□ 0.56
CPSF4-205ENST00000440514 NHEJ1Q9H9Q4 299 aaPredicted RBP18.58■□□□□ 0.56
CPSF4-205ENST00000440514 MRPL47Q9HD33 250 aaKnown RBP18.58■□□□□ 0.56
CPSF4-205ENST00000440514 POLMQ9NP87 494 aaPredicted RBP18.58■□□□□ 0.56
CPSF4-205ENST00000440514 IGLV3-10A0A075B6K4 115 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 DRGXA6NNA5 263 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 FAM72CH0Y354 149 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 AXIN1O15169 862 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 AKR1B10O60218 316 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CLDN11O75508 207 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CYP1A2P05177 515 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 HLA-EP13747 358 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 DESP17661 470 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 POLR2EP19388 210 aaKnown RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 MZF1P28698 734 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CTSOP43234 321 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CDH4P55283 916 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 SCAPQ12770 1279 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 ZNF177Q13360 481 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 PTPRNQ16849 979 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 PLEKHG6Q3KR16 790 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 FAM72AQ5TYM5 149 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 MANEALQ5VSG8 457 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 DAB2IPQ5VWQ8 1189 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 FAM72DQ6L9T8 149 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 SERPINA13PQ6UXR4 307 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 SLFN11Q7Z7L1 901 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 RASSF3Q86WH2 238 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 FAM72BQ86X60 149 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 PYROXD2Q8N2H3 581 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 ARFGAP1Q8N6T3 406 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 ZNF366Q8N895 744 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 HMGB4Q8WW32 186 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 PEBP4Q96S96 227 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 NUP85Q9BW27 656 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CD248Q9HCU0 757 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 GPATCH2LQ9NWQ4 482 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 KIAA1522Q9P206 1035 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-205ENST00000440514 OR12D3Q9UGF7 316 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 NEU3Q9UQ49 428 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 DOCK4Q8N1I0 1966 aa18.57■□□□□ 0.56
CPSF4-205ENST00000440514 CKAP5Q14008 2032 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 TIMM44O43615 452 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 DLDP09622 509 aaKnown RBP18.56■□□□□ 0.56
CPSF4-205ENST00000440514 ENPP2Q13822 863 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 EFHC2Q5JST6 749 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 ACBD5Q5T8D3 534 aaPredicted RBP18.56■□□□□ 0.56
CPSF4-205ENST00000440514 FNIP1Q8TF40 1166 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 TTC17Q96AE7 1141 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 BTBD6Q96KE9 485 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 CCDC42Q96M95 316 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 ZYG11BQ9C0D3 744 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 OSBPL2Q9H1P3 480 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 SLC6A17Q9H1V8 727 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 BCCIPQ9P287 314 aaKnown RBP eCLIP18.56■□□□□ 0.56
CPSF4-205ENST00000440514 EBF1Q9UH73 591 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 FZD10Q9ULW2 581 aa18.56■□□□□ 0.56
CPSF4-205ENST00000440514 NYNRINQ9P2P1 1898 aaKnown RBP18.55■□□□□ 0.56
CPSF4-205ENST00000440514 PROB1E7EW31 1015 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 NPC1O15118 1278 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 HRO43593 1189 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 MOCS3O95396 460 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 ATP5BP06576 529 aaKnown RBP18.55■□□□□ 0.56
CPSF4-205ENST00000440514 EPHX1P07099 455 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 RHOCP08134 193 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 GABRG2P18507 467 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 NRG1Q02297 640 aaPredicted RBP18.55■□□□□ 0.56
CPSF4-205ENST00000440514 RNF219Q5W0B1 726 aaPredicted RBP18.55■□□□□ 0.56
CPSF4-205ENST00000440514 MRGPRX3Q96LB0 322 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 ZNF212Q9UDV6 495 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 PCSK1NQ9UHG2 260 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 ANAPC7Q9UJX3 599 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 TBC1D30Q9Y2I9 924 aa18.55■□□□□ 0.56
CPSF4-205ENST00000440514 CCDC163A0A0D9SF12 145 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 LRCH4O75427 683 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 RNF8O76064 485 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 ALDH1A2O94788 518 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 LRIG2O94898 1065 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 ASLP04424 464 aa18.54■□□□□ 0.56
CPSF4-205ENST00000440514 STK19P49842 368 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms