RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CTC1Q2NKJ3 1217 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 RAB41Q5JT25 222 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 FAM72AQ5TYM5 149 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 FAM72DQ6L9T8 149 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CLNKQ7Z7G1 428 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 FAM72BQ86X60 149 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 PSTKQ8IV42 348 aaKnown RBP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 IGDCC3Q8IVU1 814 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 PXYLP1Q8TE99 480 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 SUSD3Q96L08 255 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 GORASP1Q9BQQ3 440 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 THSD7BQ9C0I4 1608 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 C9IYK1 514 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 HHLA1C9JL84 531 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CAPN15O75808 1086 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CYP11A1P05108 521 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 GRK4P32298 578 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 KPNB1Q14974 876 aaKnown RBP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 SLC39A12Q504Y0 691 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 ACSBG2Q5FVE4 666 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CLLU1OSQ5K130 101 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 FAM171BQ6P995 826 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 MYO18AQ92614 2054 aaKnown RBP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 RTP4Q96DX8 246 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 PAFAH2Q99487 392 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 COLEC11Q9BWP8 271 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 TKTL2Q9H0I9 626 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 IRAK4Q9NWZ3 460 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 RCOR3Q9P2K3 495 aaPredicted RBP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 SQORQ9Y6N5 450 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 E7ESA3 106 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 C2CD2LO14523 706 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 B4GALT3O60512 393 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 TADA2AO75478 443 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 EOMESO95936 686 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 OCRLQ01968 901 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 NR1H3Q13133 447 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 PLEKHG4Q58EX7 1191 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 LHX8Q68G74 356 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 CD300LGQ6UXG3 332 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 LRRC74BQ6ZQY2 392 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.08
LIMD1-202ENST00000440097 DTX3LQ8TDB6 740 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 CSNK1G1Q9HCP0 422 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 SAR1AQ9NR31 198 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 PCMTD2Q9NV79 361 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 DNAJB4Q9UDY4 337 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 ZC3H7BQ9UGR2 993 aaKnown RBP14.52□□□□□ -0.08
LIMD1-202ENST00000440097 DCTN4Q9UJW0 460 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 USP3Q9Y6I4 520 aa14.52□□□□□ -0.08
LIMD1-202ENST00000440097 PDK1Q15118 436 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 SPDYAQ5MJ70 313 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 CASC4Q6P4E1 433 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 LRRC8DQ7L1W4 858 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 STKLD1Q8NE28 680 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF75CPQ92670 426 aaPredicted RBP14.52□□□□□ -0.09
LIMD1-202ENST00000440097 PHACTR1Q9C0D0 580 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 SIK2Q9H0K1 926 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 ACSS3Q9H6R3 686 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 WDR6Q9NNW5 1121 aaKnown RBP14.52□□□□□ -0.09
LIMD1-202ENST00000440097 ANLNQ9NQW6 1124 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 SLC24A2Q9UI40 661 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 SMG5Q9UPR3 1016 aaKnown RBP14.52□□□□□ -0.09
LIMD1-202ENST00000440097 SNX10Q9Y5X0 201 aa14.52□□□□□ -0.09
LIMD1-202ENST00000440097 KCNK1O00180 336 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 RNF103O00237 685 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 F9P00740 461 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 GSTA2P09210 222 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SRGAP2BP0DMP2 458 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 VAV1P15498 845 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 ERCC2P18074 760 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 ARPP19P56211 112 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SLC34A1Q06495 639 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 DRAXINQ8NBI3 349 aaPredicted RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 P2RY11Q96G91 374 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 PGLYRP2Q96PD5 576 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 CYTH2Q99418 400 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 EPAS1Q99814 870 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TBC1D13Q9NVG8 400 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 ARL8BQ9NVJ2 186 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 PIH1D1Q9NWS0 290 aaKnown RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 FBXW11Q9UKB1 542 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 NUDT5Q9UKK9 219 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TCRBV9S1A1TA0A576 114 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 GOLGA8RI6L899 631 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 ARVCFO00192 962 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 TBX10O75333 385 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 GCATO75600 419 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 INHBAP08476 426 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 KRT4P19013 534 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SLC5A3P53794 718 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 CUL3Q13618 768 aa14.51□□□□□ -0.09
LIMD1-202ENST00000440097 SEPT7Q16181 437 aaKnown RBP14.51□□□□□ -0.09
LIMD1-202ENST00000440097 KBTBD12Q3ZCT8 623 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms