RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 NMRAL1Q9HBL8 299 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 TBC1D23Q9NUY8 699 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 STK32BQ9NY57 414 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 GGA3Q9NZ52 723 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 AKT3Q9Y243 479 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 A0A1B0GTW7 788 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 TK2O00142 265 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 PEX10O60683 326 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 ZNF189O75820 626 aaPredicted RBP9.26□□□□□ -0.93
COPB1-202ENST00000439561 ATP5BP06576 529 aaKnown RBP9.26□□□□□ -0.93
COPB1-202ENST00000439561 STT3AP46977 705 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 EFNA5P52803 228 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 MTTPP55157 894 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 VPS72Q15906 364 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 AGKQ53H12 422 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 SLC9A4Q6AI14 798 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 ZNF554Q86TJ5 538 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 NCAPG2Q86XI2 1143 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 TMEM192Q8IY95 271 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 FAM47BQ8NA70 645 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 SIGLEC10Q96LC7 697 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 VPS33BQ9H267 617 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 RUVBL2Q9Y230 463 aaKnown RBP9.26□□□□□ -0.93
COPB1-202ENST00000439561 MYRFQ9Y2G1 1151 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 MFHAS1Q9Y4C4 1052 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 PPME1Q9Y570 386 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 NFASCO94856 1347 aa9.26□□□□□ -0.93
COPB1-202ENST00000439561 NHSQ6T4R5 1651 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 FAM159BA6NKW6 160 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 ZNF839A8K0R7 811 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 VILLO15195 856 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 LTFP02788 710 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 EDN1P05305 212 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 KCNA2P16389 499 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 GOT1P17174 413 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 ASPAP45381 313 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 GRIA4P48058 902 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 HSPA13P48723 471 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 PLK1P53350 603 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 CNTN2Q02246 1040 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 CBX3Q13185 183 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 LSM12Q3MHD2 195 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 ZFP1Q6P2D0 407 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 GK5Q6ZS86 529 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 RYBPQ8N488 228 aaPredicted RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 METTL25Q8N6Q8 603 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 MAPK15Q8TD08 544 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 LRTOMTQ8WZ04 291 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 LPAR1Q92633 364 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 APBB2Q92870 758 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 RNF34Q969K3 372 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 AGAP2Q99490 1192 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 NT5C1AQ9BXI3 368 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 NOL11Q9H8H0 719 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 COQ10BQ9H8M1 238 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 AP4S1Q9Y587 144 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 STRCP1A6NGW2 1772 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 VAPBO95292 243 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 CDK4P11802 303 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 MYL4P12829 197 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 CKMT2P17540 419 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 RPL10P27635 214 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 TCF7P36402 384 aaPredicted RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 LAMTOR4Q0VGL1 99 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 MPP3Q13368 585 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 HNRNPDQ14103 355 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 NEDD8Q15843 81 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 ADGRG6Q86SQ4 1221 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 PYROXD2Q8N2H3 581 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 CERS2Q96G23 380 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 CNDP1Q96KN2 507 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 GATA5Q9BWX5 397 aaPredicted RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 TRPC5Q9UL62 973 aaPredicted RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
COPB1-202ENST00000439561 TNRC6CQ9HCJ0 1690 aaKnown RBP9.25□□□□□ -0.93
COPB1-202ENST00000439561 VWA5AO00534 786 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 TIPRLO75663 272 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 VDRP11473 427 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 PGAM1P18669 254 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ENTPD1P49961 510 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ZNF132P52740 706 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 CDKL1Q00532 357 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 MYBPC1Q00872 1141 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ARL13AQ5H913 290 aaPredicted RBP9.24□□□□□ -0.93
COPB1-202ENST00000439561 PITRM1Q5JRX3 1037 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 IL23RQ5VWK5 629 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 JADE1Q6IE81 842 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ABHD15Q6UXT9 468 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 MAVSQ7Z434 540 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ANKRD23Q86SG2 305 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 KBTBD6Q86V97 674 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 ZNF354CQ86Y25 554 aa9.24□□□□□ -0.93
COPB1-202ENST00000439561 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms