RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TMEM160Q9NX00 188 aa3.92□□□□□ -1.78
VPS41-207ENST00000439468 SEMA5BQ9P283 1151 aa3.92□□□□□ -1.78
VPS41-207ENST00000439468 PDP2Q9P2J9 529 aa3.92□□□□□ -1.78
VPS41-207ENST00000439468 BAG5Q9UL15 447 aa3.92□□□□□ -1.78
VPS41-207ENST00000439468 COPG1Q9Y678 874 aaKnown RBP3.92□□□□□ -1.78
VPS41-207ENST00000439468 SETD1BQ9UPS6 1966 aaKnown RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 A0A1B0GVC2 190 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 VWA3AA6NCI4 1184 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 BTBD19C9JJ37 291 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 H3BNC9 293 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 GRM8O00222 908 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 KLK10O43240 276 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 TFRCP02786 760 aaKnown RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 CYP3A4P08684 503 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 ATP1A3P13637 1013 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CD53P19397 219 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 NDUFS1P28331 727 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CDK7P50613 346 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 UBE3AQ05086 875 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CHRNDQ07001 517 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CDK18Q07002 472 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 TDGQ13569 410 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CBFBQ13951 182 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 Q4G0T1 1027 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 UBAP2Q5T6F2 1119 aaKnown RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 TFAP2DQ7Z6R9 452 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 ZNF366Q8N895 744 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 OSR1Q8TAX0 266 aaPredicted RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 HTRA1Q92743 480 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 KCNJ9Q92806 393 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 SPRTNQ9H040 489 aaPredicted RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 WDR26Q9H7D7 661 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 IL21RQ9HBE5 538 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 MLXIPLQ9NP71 852 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 ASNSD1Q9NWL6 643 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 TRNAU1APQ9NX07 287 aaKnown RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 TUBA8Q9NY65 449 aaPredicted RBP3.91□□□□□ -1.78
VPS41-207ENST00000439468 MTMR4Q9NYA4 1195 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 ELOVL5Q9NYP7 299 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 GJD2Q9UKL4 321 aa3.91□□□□□ -1.78
VPS41-207ENST00000439468 CYP3A7-CYP3A51PA0A087WV96 503 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 CYP2D7A0A087X1C5 515 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 A6NLC8 198 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 RRHO14718 337 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 PPEF2O14830 753 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 CNPP09543 421 aaKnown RBP3.9□□□□□ -1.79
VPS41-207ENST00000439468 ALDOCP09972 364 aaKnown RBP3.9□□□□□ -1.79
VPS41-207ENST00000439468 TNFAIP3P21580 790 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 MATN1P21941 496 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 CYP3A7P24462 503 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 AVPR2P30518 371 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 HOXD12P35452 270 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 IDUAP35475 653 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 LIFRP42702 1097 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 ZNF84P51523 738 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 GHRHRQ02643 423 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 TLE3Q04726 772 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 EFR3AQ14156 821 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 KCNB1Q14721 858 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 SEC23BQ15437 767 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 CNGA3Q16281 694 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 TBRG1Q3YBR2 411 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 SLC9C2Q5TAH2 1124 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 C11orf87Q6NUJ2 197 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 VSTM1Q6UX27 236 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 SLC39A5Q6ZMH5 540 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 ZNF813Q6ZN06 617 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 LAS2Q8IYD9 372 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 ADGRF3Q8IZF5 1079 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 VPS52Q8N1B4 723 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 NANOGP1Q8N7R0 232 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 PTGR2Q8N8N7 351 aaPredicted RBP3.9□□□□□ -1.79
VPS41-207ENST00000439468 FSIP1Q8NA03 581 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 SLC2A12Q8TD20 617 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 CELF1Q92879 486 aaKnown RBP3.9□□□□□ -1.79
VPS41-207ENST00000439468 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
VPS41-207ENST00000439468 PIGSQ96S52 555 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 MAF1Q9H063 256 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 PRDM16Q9HAZ2 1276 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 NOD2Q9HC29 1040 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 PGAP2Q9UHJ9 254 aa3.9□□□□□ -1.79
VPS41-207ENST00000439468 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 NPIPB13A6NJU9 1138 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 NPIPB5A8MRT5 1133 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 NPIPB4C9JG80 1138 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 ADAM10O14672 748 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 HOXC11O43248 304 aaPredicted RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 MOSPD3O75425 235 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 BCAR3O75815 825 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 TOP3BO95985 862 aaKnown RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 ALDOAP04075 364 aaKnown RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 HNRNPA1P09651 372 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS41-207ENST00000439468 RFPL3SP0C7P2 107 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 ATP5F1P24539 256 aaPredicted RBP3.89□□□□□ -1.79
VPS41-207ENST00000439468 SLC8A1P32418 973 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 PCP4P48539 62 aa3.89□□□□□ -1.79
VPS41-207ENST00000439468 CCT4P50991 539 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms