RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSTF3-203ENST00000438862 LINC00301Q8NCQ3 95 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 USP28Q96RU2 1077 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 USP29Q9HBJ7 922 aa11.62□□□□□ -0.55
CSTF3-203ENST00000438862 A0A1B0GVM2 712 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 A0A1W2PP55 124 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CLEC18AA5D8T8 446 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 LATO43561 262 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 SDC3O75056 442 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 RNASEH2AO75792 299 aaKnown RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 FAM200BP0CF97 657 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 LONP1P36776 959 aaKnown RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CLN3Q13286 438 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CST6Q15828 149 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 MBLAC2Q68D91 279 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 FAM173BQ6P4H8 233 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 SND1Q7KZF4 910 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 TMC6Q7Z403 805 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 ACOT1Q86TX2 421 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CRYBG2Q8N1P7 616 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 CLEC18CQ8NCF0 446 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 SGF29Q96ES7 293 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 PSMG3-AS1Q96PY0 264 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 VRTNQ9H8Y1 702 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 PNPLA8Q9NP80 782 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 SERGEFQ9UGK8 458 aa11.61□□□□□ -0.55
CSTF3-203ENST00000438862 ATXN7L1Q9ULK2 861 aaPredicted RBP11.61□□□□□ -0.55
CSTF3-203ENST00000438862 LRRK2Q5S007 2527 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 MID1O15344 667 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 EFSO43281 561 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 HMBSP08397 361 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 ALPPL2P10696 532 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 PABPC1P11940 636 aaKnown RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 CCDC130P13994 396 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 GOT1P17174 413 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 POLR2EP19388 210 aaKnown RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TRIM21P19474 475 aaKnown RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 DGKAP23743 735 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 HOXD9P28356 352 aaPredicted RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 CASP5P51878 434 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 MYL6P60660 151 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 ST8SIA6P61647 398 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 EFEMP1Q12805 493 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 STAT4Q14765 748 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 GPRIN1Q7Z2K8 1008 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 CLEC14AQ86T13 490 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 EXTL1Q92935 676 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 DNAJC19Q96DA6 116 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 PRR11Q96HE9 360 aaPredicted RBP11.6□□□□□ -0.55
CSTF3-203ENST00000438862 CGRRF1Q99675 332 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 OSBPL2Q9H1P3 480 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 ABCB8Q9NUT2 735 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 RASAL2Q9UJF2 1139 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 GGA2Q9UJY4 613 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 STRIP2Q9ULQ0 834 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 MAN2B2Q9Y2E5 1009 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 NOTCH2Q04721 2471 aa11.6□□□□□ -0.55
CSTF3-203ENST00000438862 NBPF19A0A087WUL8 3843 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 NEMP2A6NFY4 417 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SPTLC2O15270 562 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SIN3BO75182 1162 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SLC8A1P32418 973 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 AFMP43652 599 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 KIF11P52732 1056 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 ARID5BQ14865 1188 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 PSMD6Q15008 389 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 STK38Q15208 465 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 HNRNPA1L2Q32P51 320 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 ZNF667Q5HYK9 610 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 CLEC20AQ6ZU45 233 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 STXBP4Q6ZWJ1 553 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SCD5Q86SK9 330 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 ZNF557Q8N988 423 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms