RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CEP350Q5VT06 3117 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 HACD1B0YJ81 288 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 H3BRJ5 948 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 M0QYT0 321 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 APOL1O14791 398 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CAPN9O14815 690 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 MCF2LO15068 1137 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 IRAK2O43187 625 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ABLIM3O94929 683 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 C1RP00736 705 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 FAM153BP0C7A2 387 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RARGP13631 454 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CSF2RAP15509 400 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RAG1P15918 1043 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 HOXC13P31276 330 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 GRIK1P39086 918 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 MAGEA6P43360 314 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 YWHAGP61981 247 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RPL10AP62906 217 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 OTUD4Q01804 1114 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CREMQ03060 361 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 DEUP1Q05D60 604 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 GPS2Q13227 327 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 DPYSQ14117 519 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SLMAPQ14BN4 828 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 PPP1R7Q15435 360 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CA9Q16790 459 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CDO1Q16878 200 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ARL13BQ3SXY8 428 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 FAM153CQ494X1 144 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ZC3H12AQ5D1E8 599 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SNX30Q5VWJ9 437 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 HIBCHQ6NVY1 386 aaPredicted RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SCYL2Q6P3W7 929 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RSPO2Q6UXX9 243 aaPredicted RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 Q6ZS46 218 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ZNF365Q70YC5 407 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 BZW1Q7L1Q6 419 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 TMC3Q7Z5M5 1100 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SCD5Q86SK9 330 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 TMEM173Q86WV6 379 aaPredicted RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 DDX42Q86XP3 938 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RFX6Q8HWS3 928 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RGL4Q8IZJ4 473 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 KRT222Q8N1A0 295 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CCDC185Q8N715 623 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 FBXO25Q8TCJ0 367 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 DQX1Q8TE96 717 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 IFT81Q8WYA0 676 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 OVCA2Q8WZ82 227 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 NDRG1Q92597 394 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 HSPH1Q92598 858 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CLP1Q92989 425 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 OLFM3Q96PB7 478 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CSPG4P5Q96PW8 444 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 HAPLN3Q96S86 360 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SH3GL2Q99962 352 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CALN1Q9BXU9 219 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 MAK16Q9BXY0 300 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 RHOBTB2Q9BYZ6 727 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 BRD8Q9H0E9 1235 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 NEUROG2Q9H2A3 272 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 ARHGEF38Q9NXL2 777 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 CWC15Q9P013 229 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 FNIP2Q9P278 1114 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 MTRF1LQ9UGC7 380 aaKnown RBP7.9□□□□□ -1.14
HMGB2-202ENST00000438704 FAM153AQ9UHL3 310 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SHOC2Q9UQ13 582 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 SNX24Q9Y343 169 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 KCNMB2Q9Y691 235 aa7.9□□□□□ -1.14
HMGB2-202ENST00000438704 KCNU1A8MYU2 1149 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DNALI1O14645 258 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DCLK1O15075 740 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 MMP20O60882 483 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 KRT14P02533 472 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 NUDT17P0C025 328 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 OR4Q2P0C623 313 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 LINC00271P0C7V0 271 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SLC2A3P11169 496 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 NCAM1P13591 858 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ATF2P15336 505 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 IBSPP21815 317 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ARL4AP40617 200 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 TUFMP49411 452 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PITX1P78337 314 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DEFB103AP81534 67 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ZNF33AQ06730 810 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 CALCOCO2Q13137 446 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SNX1Q13596 522 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 RAB33AQ14088 237 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 HLTFQ14527 1009 aaKnown RBP eCLIP7.89□□□□□ -1.155e-31■□□□□ 8.2
HMGB2-202ENST00000438704 MORF4L2Q15014 288 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PAFAH1B3Q15102 231 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PSMD5Q16401 504 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SWI5Q1ZZU3 235 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms