RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 RFWD2Q8NHY2 731 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ADAM32Q8TC27 787 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 TFB1MQ8WVM0 346 aaKnown RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 MIPEPQ99797 713 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC13A1Q9BZW2 595 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ZCWPW1Q9H0M4 648 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 VPS11Q9H270 941 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ARHGEF4Q9NR80 690 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 FZD10Q9ULW2 581 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 USP3Q9Y6I4 520 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 A0A0G2JND7 137 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 ZNF487B1APH4 448 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SMIM24O75264 130 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 DAB1O75553 588 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 LUC7L3O95232 432 aaKnown RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 BGNP21810 368 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 ETV4P43268 484 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 MAGEA6P43360 314 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 NR2C2P49116 596 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 AP1B1Q10567 949 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 OTUD1Q5VV17 481 aaPredicted RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 BSPRYQ5W0U4 402 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 TMEM154Q6P9G4 183 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 HFE2Q6ZVN8 426 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 NLRP9Q7RTR0 991 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 CTU1Q7Z7A3 348 aaKnown RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 LRRTM3Q86VH5 581 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 UNC5BQ8IZJ1 945 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 HTR3CQ8WXA8 447 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SEPT8Q92599 483 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SCLYQ96I15 445 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SIGLEC10Q96LC7 697 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM193BQ96PV7 902 aaPredicted RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SRPK1Q96SB4 655 aaKnown RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 PKMYT1Q99640 499 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 FRMD8Q9BZ67 464 aaPredicted RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 IQCGQ9H095 443 aaKnown RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 PNPLA8Q9NP80 782 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SEPT10Q9P0V9 454 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 PTPRDP23468 1912 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 M0QYT0 321 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 COPEO14579 308 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 NRP1O14786 923 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 DCTN3O75935 186 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 KRT37O76014 449 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 TYMPP19971 482 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 ATP6V1C1P21283 382 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 BDNFP23560 247 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 GATMP50440 423 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 MXRA7P84157 204 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC18A2Q05940 514 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 CASC4Q6P4E1 433 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 MTDHQ86UE4 582 aaKnown RBP14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 NLRC5Q86WI3 1866 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 ABI1Q8IZP0 508 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 THEM5Q8N1Q8 247 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 SH3GL3Q99963 347 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 MECRQ9BV79 373 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 TSSK1BQ9BXA7 367 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 KANSL3Q9P2N6 904 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 PCDHB8Q9UN66 801 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
PTCHD3-201ENST00000438700 ARHGEF37A1IGU5 675 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 HHLA1C9JL84 531 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 PRKCHP24723 683 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 MAGEA3P43357 314 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 ERFP50548 548 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 YWHAHQ04917 246 aaPredicted RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 MROH9Q5TGP6 573 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 TP53INP2Q8IXH6 220 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 CCNYQ8ND76 341 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 MCUQ8NE86 351 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 PRR11Q96HE9 360 aaPredicted RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 DLGAP2Q9P1A6 1054 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC17A6Q9P2U8 582 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 TTC3P53804 2025 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 FBXO21O94952 628 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 SNRPAP09012 282 aaKnown RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 USP17L7P0C7H9 530 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 DHRS4L1P0CG22 281 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 TROVE2P10155 538 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 COL6A1P12109 1028 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 CCL23P55773 120 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 DAOAP59103 153 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 TSPY1Q01534 308 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 RAB41Q5JT25 222 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 PDCD7Q8N8D1 485 aaKnown RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 GSDMBQ8TAX9 411 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 DNAJC9Q8WXX5 260 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 TSC22D3Q99576 134 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 EBNA1BP2Q99848 306 aaKnown RBP14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 ELAC1Q9H777 363 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms