RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SNX15Q9NRS6 342 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SETD4Q9NVD3 440 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RBM22Q9NW64 420 aaKnown RBP eCLIP6.83□□□□□ -1.327e-6■■■■□ 24.6
CSDE1-205ENST00000438362 RHBDL2Q9NX52 303 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RRN3Q9NYV6 651 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C10orf71Q711Q0 1435 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 SMNDC1O75940 238 aaKnown RBP eCLIP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PIGRP01833 764 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ALBP02768 609 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CTSHP09668 335 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 MLNP12872 115 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.329e-10■■□□□ 13.4
CSDE1-205ENST00000438362 XIAPP98170 497 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 USP4Q13107 963 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 FASTKQ14296 549 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 INSCQ1MX18 579 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 MRNIPQ6NTE8 343 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ISLR2Q6UXK2 745 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TSHZ1Q6ZSZ6 1077 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TAS2R42Q7RTR8 314 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF410Q86VK4 478 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZDHHC14Q8IZN3 488 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CMASQ8NFW8 434 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 DCAKDQ8WVC6 231 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 EDEM1Q92611 657 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PHF21BQ96EK2 531 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 MAML3Q96JK9 1138 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF333Q96JL9 665 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 KATNAL1Q9BW62 490 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 EPB41L4BQ9H329 900 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 POPDC2Q9HBU9 364 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 DMAP1Q9NPF5 467 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 DDX18Q9NVP1 670 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 BLOC1S6Q9UL45 172 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RAP2CQ9Y3L5 183 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 AP4S1Q9Y587 144 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 WASF2Q9Y6W5 498 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 COMMD3-BMI1R4GMX3 469 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TMEM114B3SHH9 223 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 MRASO14807 208 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TBX10O75333 385 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RECQL4O94761 1208 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 LGALS2P05162 132 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 LYNP07948 512 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 IVDP26440 423 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 IL1R2P27930 398 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 HMOX2P30519 316 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RPL5P46777 297 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CSE1LP55060 971 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 NME5P56597 212 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF470Q6ECI4 717 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 EP400NLQ6ZTU2 488 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PIGZQ86VD9 579 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 SLC22A9Q8IVM8 553 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 BHLHE22Q8NFJ8 381 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RP9Q8TA86 221 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 P2RY11Q96G91 374 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 SYT15Q9BQS2 421 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CCDC28BQ9BUN5 200 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TRPC7Q9HCX4 862 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RIC8BQ9NVN3 520 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 SYBUQ9NX95 663 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CCDC167Q9P0B6 97 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 C6orf203Q9P0P8 240 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TSR3Q9UJK0 312 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PRPF19Q9UMS4 504 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 NENFQ9UMX5 172 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 V9GYQ6 96 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 TCRBV7S3A2A0A539 114 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 C2CD4BA6NLJ0 364 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 NR5A2O00482 541 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 B3GAT3O94766 335 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RHOBTB1O94844 696 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 UQCRBP14927 111 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 LHX1P48742 406 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 OGDHQ02218 1023 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZBTB17Q13105 803 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CAPRIN1Q14444 709 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PRKD1Q15139 912 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 LPCAT4Q643R3 524 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 IL31Q6EBC2 164 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 LPCAT2Q7L5N7 544 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZSCAN18Q8TBC5 510 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 RMND5BQ96G75 393 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 CSPG4P5Q96PW8 444 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 B3GNT5Q9BYG0 378 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PRKD2Q9BZL6 878 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 DDX43Q9NXZ2 648 aaKnown RBP6.82□□□□□ -1.32
CSDE1-205ENST00000438362 PLA2G4CQ9UP65 541 aa6.82□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF536O15090 1300 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 KANSL1LA0AUZ9 987 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TTC36A6NLP5 189 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MDM4O15151 490 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TYROBPO43914 113 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MGEA5O60502 916 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms