RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NYNRINQ9P2P1 1898 aaKnown RBP23.66■■□□□ 1.38
CPSF4-204ENST00000436336 KIF26AQ9ULI4 1882 aaPredicted RBP23.65■■□□□ 1.38
CPSF4-204ENST00000436336 GFRA2O00451 464 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 NCAM2O15394 837 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 ITGAVP06756 1048 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 CDH4P55283 916 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 DR1Q01658 176 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 FAM78AQ5JUQ0 283 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 ZC3H18Q86VM9 953 aaKnown RBP23.65■■□□□ 1.38
CPSF4-204ENST00000436336 CFAP52Q8N1V2 620 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 SMRP1Q8NCR6 262 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 CCDC114Q96M63 670 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 TBC1D14Q9P2M4 693 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 ZNF212Q9UDV6 495 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 ZNF148Q9UQR1 794 aa23.65■■□□□ 1.38
CPSF4-204ENST00000436336 TYW5A2RUC4 315 aaKnown RBP23.64■■□□□ 1.38
CPSF4-204ENST00000436336 TRDMT1O14717 391 aaKnown RBP23.64■■□□□ 1.38
CPSF4-204ENST00000436336 RAD51CO43502 376 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 MAP3K6O95382 1288 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 MAPKAPK2P49137 400 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 CHST9Q7L1S5 443 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 TFAP2DQ7Z6R9 452 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 UMODL1-AS1Q8N2C9 162 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 MYLIPQ8WY64 445 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 NECTIN4Q96NY8 510 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 TRPV4Q9HBA0 871 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 NDFIP2Q9NV92 336 aa23.64■■□□□ 1.38
CPSF4-204ENST00000436336 HACD1B0YJ81 288 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 H7C0C1 242 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 TSPAN3O60637 253 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 CLDN11O75508 207 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 MX2P20592 715 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 PTGIRP43119 386 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 ATP5OP48047 213 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 RPS24P62847 133 aaKnown RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 PDK1Q15118 436 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 CIR1Q86X95 450 aaPredicted RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 HJURPQ8NCD3 748 aaPredicted RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 OTUB2Q96DC9 234 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 TMA16Q96EY4 203 aaKnown RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 CDX2Q99626 313 aaPredicted RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 OBP2AQ9NY56 170 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 CD207Q9UJ71 328 aa23.64■■□□□ 1.37
CPSF4-204ENST00000436336 V9GYY5 206 aaPredicted RBP23.64■■□□□ 1.37
CPSF4-204ENST00000436336 A0A1B0GVM2 712 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 TCAF2A6NFQ2 919 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 PPP1R12AO14974 1030 aaPredicted RBP23.63■■□□□ 1.37
CPSF4-204ENST00000436336 CTIFO43310 598 aaKnown RBP23.63■■□□□ 1.37
CPSF4-204ENST00000436336 ECEL1O95672 775 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 SGSHP51688 502 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 NDST2P52849 883 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 ERCC6LQ2NKX8 1250 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 AFMIDQ63HM1 303 aa23.63■■□□□ 1.37
CPSF4-204ENST00000436336 DARS2Q6PI48 645 aaKnown RBP23.63■■□□□ 1.37
CPSF4-204ENST00000436336 CDKL3Q8IVW4 592 aaPredicted RBP23.63■■□□□ 1.37
CPSF4-204ENST00000436336 TDRD5Q8NAT2 981 aaKnown RBP23.63■■□□□ 1.37
CPSF4-204ENST00000436336 BCLAF3A2AJT9 711 aaKnown RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 FAM187AA6NFU0 413 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 SLC9A3R1O14745 358 aaPredicted RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 TTI1O43156 1089 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 GAS8O95995 478 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 RHOXF2BP0C7M4 288 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 GALNT2Q10471 571 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 MPPE1Q53F39 396 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 SLC45A4Q5BKX6 768 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 Q7L0L9 218 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 ARHGAP12Q8IWW6 846 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 CELF6Q96J87 481 aaKnown RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 QKIQ96PU8 341 aaKnown RBP eCLIP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 RHOXF2Q9BQY4 288 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 TMEM121Q9BTD3 319 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 BRD8Q9H0E9 1235 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 POMKQ9H5K3 350 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 MYOFQ9NZM1 2061 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 SZT2Q5T011 3432 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 CFAP69A5D8W1 941 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 OR1E1P30953 314 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 MRPS25P82663 173 aaKnown RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 MPP7Q5T2T1 576 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 SYDE1Q6ZW31 735 aaPredicted RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 JAMLQ86YT9 394 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 TP53INP2Q8IXH6 220 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 ALLCQ8N6M5 410 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 NETO2Q8NC67 525 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 TFB1MQ8WVM0 346 aaKnown RBP23.62■■□□□ 1.37
CPSF4-204ENST00000436336 HDAC11Q96DB2 347 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 MYADMQ96S97 322 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 SLC39A8Q9C0K1 460 aa23.62■■□□□ 1.37
CPSF4-204ENST00000436336 TBL1XO60907 577 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 ZNF189O75820 626 aaPredicted RBP23.61■■□□□ 1.37
CPSF4-204ENST00000436336 STIP1P31948 543 aaKnown RBP23.61■■□□□ 1.37
CPSF4-204ENST00000436336 VIPR2P41587 438 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 GSTA5Q7RTV2 222 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 CCDC33Q8N5R6 958 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 BPIFB1Q8TDL5 484 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 RSAD2Q8WXG1 361 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 SUSD6Q92537 303 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 E2F7Q96AV8 911 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 RSPRY1Q96DX4 576 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms