RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RPS14P62263 151 aaKnown RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 GCNT1Q02742 428 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 NNTQ13423 1086 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 PIK3R6Q5UE93 754 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TMEM215Q68D42 235 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 PMF1Q6P1K2 205 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 RRAGAQ7L523 313 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 BHLHA9Q7RTU4 235 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 GLRX5Q86SX6 157 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 ADIPOR2Q86V24 386 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 CHSY1Q86X52 802 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 ZC3H3Q8IXZ2 948 aaKnown RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 DQX1Q8TE96 717 aaKnown RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 SLC35F5Q8WV83 523 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 RNF34Q969K3 372 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 IGSF8Q969P0 613 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TIGD1Q96MW7 591 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 OMDQ99983 421 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TMEM245Q9H330 911 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 FAM204AQ9H8W3 233 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 PRSS16Q9NQE7 514 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 AASDHPPTQ9NRN7 309 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 FBXL12Q9NXK8 326 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 FTSJ1Q9UET6 329 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 RALYQ9UKM9 306 aaKnown RBP8.04□□□□□ -1.12
VPS50-203ENST00000436177 CTNND2Q9UQB3 1225 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 ANKRD6Q9Y2G4 727 aa8.04□□□□□ -1.12
VPS50-203ENST00000436177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS50-203ENST00000436177 PCNX2A6NKB5 2137 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 EDDM13A0A1B0GTR0 161 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 GOLGA6L7A0A1B0GV03 622 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 F5H5T6 163 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PMM2O15305 246 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 THAP12O43422 761 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 DFNA5O60443 496 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 RNASEH2AO75792 299 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 LETM1O95202 739 aaPredicted RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 IGLV3-27P01718 113 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 AFPP02771 609 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 SLC2A3P11169 496 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 ABCB4P21439 1286 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 USP8P40818 1118 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PSMD8P48556 350 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 SGSHP51688 502 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 OXCT1P55809 520 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 RPS24P62847 133 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 SCAPQ12770 1279 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PAK1Q13153 545 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 CST6Q15828 149 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PTPRNQ16849 979 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 KIF19Q2TAC6 998 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 HNRNPA1L2Q32P51 320 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 SLC45A4Q5BKX6 768 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 FAM133BQ5BKY9 247 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 RABGAP1LQ5R372 815 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 KIAA0895LQ68EN5 471 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 ISM2Q6H9L7 571 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 USP30Q70CQ3 517 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 DSG4Q86SJ6 1040 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PROSER1Q86XN7 944 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 DHX40Q8IX18 779 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 LGI2Q8N0V4 545 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 GALNT15Q8N3T1 639 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 UBR7Q8N806 425 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 ATP6V0D2Q8N8Y2 350 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 FIBINQ8TAL6 211 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 BIRC7Q96CA5 298 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PRICKLE1Q96MT3 831 aaPredicted RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 NOX5Q96PH1 765 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 MED15Q96RN5 788 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 PPP1R9BQ96SB3 815 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 INTS2Q9H0H0 1204 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 PABPC3Q9H361 631 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 OSGEPQ9NPF4 335 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 ATP13A2Q9NQ11 1180 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
VPS50-203ENST00000436177 SNX11Q9Y5W9 270 aa8.03□□□□□ -1.12
VPS50-203ENST00000436177 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.12
VPS50-203ENST00000436177 BIN1O00499 593 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 YKT6O15498 198 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 TNFSF14O43557 240 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 PCDHGA12O60330 932 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 CBFA2T3O75081 653 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 SIN3BO75182 1162 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 LUC7L3O95232 432 aaKnown RBP8.02□□□□□ -1.13
VPS50-203ENST00000436177 SRPRAP08240 638 aaKnown RBP8.02□□□□□ -1.13
VPS50-203ENST00000436177 SLC6A4P31645 630 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 ARRB1P49407 418 aaPredicted RBP8.02□□□□□ -1.13
VPS50-203ENST00000436177 MMP16P51512 607 aa8.02□□□□□ -1.13
VPS50-203ENST00000436177 SNX16P57768 344 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms