RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ERAP2Q6P179 960 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 PGBD2Q6P3X8 592 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 PELI3Q8N2H9 469 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 ZNF527Q8NB42 609 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 FAM71BQ8TC56 605 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 STYXQ8WUJ0 223 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 TMEM174Q8WUU8 243 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 RSC1A1Q92681 617 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 MECRQ9BV79 373 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 CHMP4AQ9BY43 222 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 HIPK2Q9H2X6 1198 aa3.76□□□□□ -1.81
CLK1-204ENST00000432425 CYP3A7-CYP3A51PA0A087WV96 503 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 CXorf65A6NEN9 183 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 MBD3L5A6NJ08 208 aaPredicted RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 SLC38A8A6NNN8 435 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 H0YGN5 161 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 CYP3A7P24462 503 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 CCKBRP32239 447 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 STAT1P42224 750 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 PGGT1BP53609 377 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 FOXL2P58012 376 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 FAM3BP58499 235 aaPredicted RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 PMPCAQ10713 525 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 MAP9Q49MG5 647 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ALG10Q5BKT4 473 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ALG10BQ5I7T1 473 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 RUSC1-AS1Q66K80 236 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 KIAA1161Q6NSJ0 714 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 GGT6Q6P531 493 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ASB5Q8WWX0 329 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 KAT2AQ92830 837 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ATP2A3Q93084 1043 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ZNF419Q96HQ0 510 aaPredicted RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 RBM38Q9H0Z9 239 aaKnown RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 OBP2BQ9NPH6 170 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 LIN7CQ9NUP9 197 aaKnown RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 CNTN6Q9UQ52 1028 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 COPG1Q9Y678 874 aaKnown RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 EFCAB8A8MWE9 144 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 MCIDASD6RGH6 385 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 MDM4O15151 490 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 SKAP2O75563 359 aaPredicted RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 TNFRSF6BO95407 300 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 IFNA2P01563 188 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 LCKP06239 509 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ITGA2BP08514 1039 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 PTK2BQ14289 1009 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ARL13AQ5H913 290 aaPredicted RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 MDGA2Q7Z553 956 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 CCDC146Q8IYE0 955 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 ADAMTS15Q8TE58 950 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 SORBS1Q9BX66 1292 aaKnown RBP3.75□□□□□ -1.81
CLK1-204ENST00000432425 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 TXNRD2Q9NNW7 524 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 SPAG4Q9NPE6 437 aa3.75□□□□□ -1.81
CLK1-204ENST00000432425 A0A087WV62 115 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 LGALS16A8MUM7 142 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 LACTBL1A8MY62 500 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 SMAD6O43541 496 aaKnown RBP3.74□□□□□ -1.81
CLK1-204ENST00000432425 CBSLP0DN79 551 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 HOXB2P14652 356 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 CHRNA5P30532 468 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 CBSP35520 551 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 PCP4P48539 62 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 RCAN1P53805 252 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 ADPRHP54922 357 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 TNFAIP2Q03169 654 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 ODF3L2Q3SX64 289 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 TRIM60Q495X7 471 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 CRELD2Q6UXH1 353 aaPredicted RBP3.74□□□□□ -1.81
CLK1-204ENST00000432425 MEPCEQ7L2J0 689 aaKnown RBP3.74□□□□□ -1.81
CLK1-204ENST00000432425 ANKS1BQ7Z6G8 1248 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 KLBQ86Z14 1044 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 EXD3Q8N9H8 876 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 CLEC4CQ8WTT0 213 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 IP6K1Q92551 441 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 RTKNQ9BST9 563 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 KATNAL1Q9BW62 490 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 SF3B5Q9BWJ5 86 aaKnown RBP3.74□□□□□ -1.81
CLK1-204ENST00000432425 BRD8Q9H0E9 1235 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 FBXO4Q9UKT5 387 aa3.74□□□□□ -1.81
CLK1-204ENST00000432425 RPS10-NUDT3A0A1W2PQS6 291 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A18PA6NE21 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 GAGE12JA6NER3 117 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A16PA6NEW6 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 AGAP5A6NIR3 686 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A9PA6NNJ1 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A5PA8MXJ8 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 KCNJ18B7U540 433 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 SPTLC2O15270 562 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 NEURL1O76050 574 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A15PP0C7V4 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 FAM90A14PP0C7W9 464 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 SETSIPP0DME0 302 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 POLE2P56282 527 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 HDAC1Q13547 482 aaPredicted RBP3.73□□□□□ -1.81
CLK1-204ENST00000432425 ERV3-1Q14264 604 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms