RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 CHSY1Q86X52 802 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
DDX56-204ENST00000431640 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
DDX56-204ENST00000431640 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 RNF34Q969K3 372 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 CASD1Q96PB1 797 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 MANSC1Q9H8J5 431 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
DDX56-204ENST00000431640 TMPRSS4Q9NRS4 437 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 MKS1Q9NXB0 559 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
DDX56-204ENST00000431640 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 MAGEB16A2A368 324 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 I3L4J1 428 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 DCTN3O75935 186 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 DDHD2O94830 711 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 DHRS4L1P0CG22 281 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 PGAM1P18669 254 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 YWHAHQ04917 246 aaPredicted RBP13.16□□□□□ -0.3
DDX56-204ENST00000431640 FPGSQ05932 587 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 CGB2Q6NT52 195 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 BHLHA9Q7RTU4 235 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 DCP1BQ8IZD4 617 aaKnown RBP13.16□□□□□ -0.3
DDX56-204ENST00000431640 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 HDAC11Q96DB2 347 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 SERAC1Q96JX3 654 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 HAPLN3Q96S86 360 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 ELAC1Q9H777 363 aaKnown RBP13.16□□□□□ -0.3
DDX56-204ENST00000431640 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 KLHL8Q9P2G9 620 aaPredicted RBP13.16□□□□□ -0.3
DDX56-204ENST00000431640 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
DDX56-204ENST00000431640 FAM72CH0Y354 149 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PIAS1O75925 651 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 POLBP06746 335 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX56-204ENST00000431640 ADRA1DP25100 572 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 DNAJB2P25686 324 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 GALNT2Q10471 571 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 BNIP1Q12981 228 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 IKBKEQ14164 716 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 SPANXN3Q5MJ09 141 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 STXBP5Q5T5C0 1151 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 FAM72AQ5TYM5 149 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 FAM72DQ6L9T8 149 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 FAM72BQ86X60 149 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 LZTR1Q8N653 840 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 DEPDC1BQ8WUY9 529 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 EDEM1Q92611 657 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PLAC1Q9HBJ0 212 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
DDX56-204ENST00000431640 KLF11O14901 512 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 RASSF9O75901 435 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 TGDSO95455 350 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 IL1BP01584 269 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 IGLV3-25P01717 112 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 ITGB1P05556 798 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 NEFHP12036 1026 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PTPN3P26045 913 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PSMB4P28070 264 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 EPHB2P29323 1055 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 GRIK1P39086 918 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 CCNFP41002 786 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 SKIV2L2P42285 1042 aaKnown RBP13.15□□□□□ -0.3
DDX56-204ENST00000431640 ETV4P43268 484 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 NPY2RP49146 381 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 RABGGTBP53611 331 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 DSC1Q08554 894 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■■□□ 19.1
DDX56-204ENST00000431640 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■□□□ 12.6
DDX56-204ENST00000431640 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
DDX56-204ENST00000431640 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 MARK2Q7KZI7 788 aaKnown RBP13.15□□□□□ -0.3
DDX56-204ENST00000431640 LRRTM3Q86VH5 581 aa13.15□□□□□ -0.3
DDX56-204ENST00000431640 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms