RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZNF772Q68DY9 489 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TIFABQ6ZNK6 161 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 HACE1Q8IYU2 909 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PCDH20Q8N6Y1 951 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TANKQ92844 425 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CXorf21Q9HAI6 301 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 AGO4Q9HCK5 861 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 VPS45Q9NRW7 570 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 GPATCH2LQ9NWQ4 482 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 USP18Q9UMW8 372 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 FZD1Q9UP38 647 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 AP4S1Q9Y587 144 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 COL5A3P25940 1745 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 GARTP22102 1010 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TUBA4AP68366 448 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TAP1Q03518 808 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 ITGADQ13349 1161 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 NR1D2Q14995 579 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 EML3Q32P44 896 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 LSM12Q3MHD2 195 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 NXNQ6DKJ4 435 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CYP2R1Q6VVX0 501 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PLD6Q8N2A8 252 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CMASQ8NFW8 434 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 FBXO28Q9NVF7 368 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TCEAL9Q9UHQ7 104 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 SLC8A2Q9UPR5 921 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PCDHB12Q9Y5F1 795 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 PCDHA11Q9Y5I1 949 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
SEMA4D-209ENST00000429836 TRUB2O95900 331 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CCNE2O96020 404 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 INHBBP09529 407 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CD19P15391 556 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 TBXAS1P24557 533 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 GRM5P41594 1212 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 ABCG1P45844 678 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CLDN10P78369 228 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 NME3Q13232 169 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 RWDD4Q6NW29 188 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 PGAM4Q8N0Y7 254 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 PQLC3Q8N755 202 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 DLG3Q92796 817 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 DCPSQ96C86 337 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SACM1LQ9NTJ5 587 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SIPA1L1O43166 1804 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CLIC3O95833 236 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 HMGCRP04035 888 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 MCF2P10911 925 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 TYK2P29597 1187 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 IGBP1P78318 339 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CDO1Q16878 200 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 BSPRYQ5W0U4 402 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CES3Q6UWW8 571 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 HM13Q8TCT9 377 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SNX27Q96L92 541 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 RSAD1Q9HA92 442 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 DUS2Q9NX74 493 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 DCDC2Q9UHG0 476 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SFMBT1Q9UHJ3 866 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CNOT11Q9UKZ1 510 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 CDH7Q9ULB5 785 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 HES2Q9Y543 173 aa11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 GPC6Q9Y625 555 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-209ENST00000429836 SOBPA7XYQ1 873 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 SOCS2O14508 198 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 RPS6KA4O75676 772 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 ERBB2P04626 1255 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 PAX3P23760 479 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 RCVRNP35243 200 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 CRKP46108 304 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 RALGDSQ12967 914 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MTMR1Q13613 665 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 HMBOX1Q6NT76 420 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 NIPAL1Q6NVV3 410 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 HERC6Q8IVU3 1022 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms