RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 PLCB1Q9NQ66 1216 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 TM7SF3Q9NS93 570 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
TTC3-208ENST00000428693 SLCO3A1Q9UIG8 710 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 DNAJC12Q9UKB3 198 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 INTS6Q9UL03 887 aaKnown RBP12.43□□□□□ -0.42
TTC3-208ENST00000428693 ZMIZ1Q9ULJ6 1067 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
TTC3-208ENST00000428693 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
TTC3-208ENST00000428693 NFE2L3Q9Y4A8 694 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 SLCO1B1Q9Y6L6 691 aa12.43□□□□□ -0.42
TTC3-208ENST00000428693 BECN2A8MW95 431 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 BNIP3LO60238 219 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 TRIM16O95361 564 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 PNMA6AP0CW24 399 aaPredicted RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 SLC2A3P11169 496 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 CCR1P32246 355 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 GGCXP38435 758 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 STK19P49842 368 aaPredicted RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 C21orf59P57076 290 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 SNX16P57768 344 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 SFSWAPQ12872 951 aaKnown RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 CST6Q15828 149 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 ZNF423Q2M1K9 1284 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 HNRNPA1L2Q32P51 320 aaKnown RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 EFHC1Q5JVL4 640 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 FAM183BPQ6ZVS7 135 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 MLKLQ8NB16 471 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 RHBDD1Q8TEB9 315 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 ZCCHC14Q8WYQ9 949 aaKnown RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 SIK2Q9H0K1 926 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 PCED1AQ9H1Q7 454 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 RSPH9Q9H1X1 276 aaPredicted RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 PABPC3Q9H361 631 aaKnown RBP12.42□□□□□ -0.42
TTC3-208ENST00000428693 TM9SF3Q9HD45 589 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 SNX11Q9Y5W9 270 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 AKAP13Q12802 2813 aa12.42□□□□□ -0.42
TTC3-208ENST00000428693 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 EDDM13A0A1B0GTR0 161 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 LRRC72A6NJI9 287 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 HSF2BPO75031 334 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 GJB3O75712 270 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 IL1BP01584 269 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SRPRAP08240 638 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 FTH1P19P0C7X4 201 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 CD27P26842 260 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SLC8A1P32418 973 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 IL9RQ01113 521 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 BNC1Q01954 994 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 CENPCQ03188 943 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SUZ12Q15022 739 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 MEA1Q16626 185 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 MAN2A1Q16706 1144 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 C9orf64Q5T6V5 341 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 KIAA0895LQ68EN5 471 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 NCEH1Q6PIU2 408 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 C11orf57Q6ZUT1 292 aaPredicted RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 BEND5Q7L4P6 421 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 STK40Q8N2I9 435 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 WDTC1Q8N5D0 677 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 OR14C36Q8NHC7 312 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SHC3Q92529 594 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 LMLNQ96KR4 655 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 MRGPRX3Q96LB0 322 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 AASDHPPTQ9NRN7 309 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 SERGEFQ9UGK8 458 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 AJAP1Q9UKB5 411 aaPredicted RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 RALYQ9UKM9 306 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 VANGL2Q9ULK5 521 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 APOBEC2Q9Y235 224 aaKnown RBP12.41□□□□□ -0.42
TTC3-208ENST00000428693 ANKRD6Q9Y2G4 727 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
TTC3-208ENST00000428693 CABIN1Q9Y6J0 2220 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3DA0A087WVF3 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3IA0A087WXS9 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3EA0A087X179 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3KA0A087X1G2 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3FA6NER0 549 aaPredicted RBP12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3LB9A6J9 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 M0QYT0 321 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 FOXN3O00409 490 aaPredicted RBP12.4□□□□□ -0.42
TTC3-208ENST00000428693 ERBB2P04626 1255 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3HP0C7X1 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 ZNF18P17022 549 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
TTC3-208ENST00000428693 ZNF177Q13360 481 aaPredicted RBP12.4□□□□□ -0.42
TTC3-208ENST00000428693 POM121L1PQ3SYA9 428 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
TTC3-208ENST00000428693 TBC1D3GQ6DHY5 549 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms