RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 BMPR1AP36894 532 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CENPAP49450 140 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ARSEP51690 589 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CAPSQ13938 189 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 KLHL38Q2WGJ6 581 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 VARS2Q5ST30 1063 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CHST9Q7L1S5 443 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 GRASPQ7Z6J2 395 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 WDR75Q8IWA0 830 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 DEFB106AQ8N104 65 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 RXFP2Q8WXD0 754 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 OTULINQ96BN8 352 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 RHBGQ9H310 441 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 VPS18Q9P253 973 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 PAK5Q9P286 719 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 EPS15L1Q9UBC2 864 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 FBXO2Q9UK22 296 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 LRRC14BA6NHZ5 514 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 SPECC1L-ADORA2AF8WAN1 911 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CCDC188H7C350 402 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ACSL3O95573 720 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 TRUB2O95900 331 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 OR4Q2P0C623 313 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 DUSP3P51452 185 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 POU4F1Q01851 419 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 COL19A1Q14993 1142 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 C9orf50Q5SZB4 431 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ZNF852Q6ZMS4 543 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 PATL1Q86TB9 770 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ZDHHC17Q8IUH5 632 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 DHX40Q8IX18 779 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 IL22RA1Q8N6P7 574 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 KAT2BQ92831 832 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 LMBRD1Q9NUN5 540 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CPQQ9Y646 472 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 FPGTO14772 594 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 SOAT2O75908 522 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 NFICP08651 508 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ITGB5P18084 799 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 CALRP27797 417 aaKnown RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ELP6Q0PNE2 266 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 TTI2Q6NXR4 508 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ECHDC2Q86YB7 292 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 HID1Q8IV36 788 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 TAGAPQ8N103 731 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 ARL14EPQ8N8R7 260 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 RERGQ96A58 199 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-206ENST00000428680 STRADBQ9C0K7 418 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 NSMCE4AQ9NXX6 385 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 AHSPQ9NZD4 102 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 L3MBTL1Q9Y468 752 aa7.4□□□□□ -1.22
CNOT4-206ENST00000428680 SMIM28A0A1B0GU29 152 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 NDUFAB1O14561 156 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 CATP04040 527 aaKnown RBP7.4□□□□□ -1.23
CNOT4-206ENST00000428680 SYPP08247 313 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 CASP6P55212 293 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 HDAC4P56524 1084 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 PDIA2Q13087 525 aaKnown RBP7.4□□□□□ -1.23
CNOT4-206ENST00000428680 PKP1Q13835 747 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 ITPRIPL2Q3MIP1 535 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 AMZ1Q400G9 498 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 PHF19Q5T6S3 580 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.23
CNOT4-206ENST00000428680 FBXL18Q96ME1 805 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 EFHD1Q9BUP0 239 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 TKTL2Q9H0I9 626 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 GKN1Q9NS71 199 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 ATP6V1HQ9UI12 483 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 NID2Q14112 1375 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 TRIOBPQ9H2D6 2365 aa7.4□□□□□ -1.23
CNOT4-206ENST00000428680 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 WDR91A4D1P6 747 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PEX12O00623 359 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CASQ2O14958 399 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 SLC9A1P19634 815 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 DPP6P42658 865 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 GRIN2CQ14957 1233 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ACAD11Q709F0 780 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 LRRC52Q8N7C0 313 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 TOP1MTQ969P6 601 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 PANX3Q96QZ0 392 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 FMO2Q99518 471 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ACE2Q9BYF1 805 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 BTBD1Q9H0C5 482 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 EPB41L5Q9HCM4 733 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 DNPEPQ9ULA0 475 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 KNTC1P50748 2209 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 C9J4A7 227 aa7.39□□□□□ -1.23
CNOT4-206ENST00000428680 CLASP2O75122 1294 aaKnown RBP7.39□□□□□ -1.23
CNOT4-206ENST00000428680 E2F6O75461 281 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms