RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZNF776Q68DI1 518 aaPredicted RBP19■□□□□ 0.63
PSPC1-202ENST00000427943 FBXL22Q6P050 247 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 ZNF397Q8NF99 534 aaPredicted RBP19■□□□□ 0.63
PSPC1-202ENST00000427943 EPS8L1Q8TE68 723 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 DNASE2BQ8WZ79 361 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 IGSF8Q969P0 613 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 RPL10LQ96L21 214 aaKnown RBP19■□□□□ 0.63
PSPC1-202ENST00000427943 RPRD1AQ96P16 312 aaPredicted RBP19■□□□□ 0.63
PSPC1-202ENST00000427943 FANCLQ9NW38 375 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 VANGL2Q9ULK5 521 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 A0A1B0GVM2 712 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 TCAF2A6NFQ2 919 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 TTC34A8MYJ7 566 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 CSRP1P21291 193 aaKnown RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 MZF1P28698 734 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 MATKP42679 507 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 STK19P49842 368 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 SULT1E1P49888 294 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 HNRNPA1L2Q32P51 320 aaKnown RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 FAM102AQ5T9C2 384 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 TTC39BQ5VTQ0 682 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 RNF219Q5W0B1 726 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 ZDHHC17Q8IUH5 632 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 HDDC3Q8N4P3 179 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 NPY6RQ99463 290 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 STK33Q9BYT3 514 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 RSPH9Q9H1X1 276 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 C6orf106Q9H6K1 298 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 FAM207AQ9NSI2 230 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 PIGVQ9NUD9 493 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 EIF2B4Q9UI10 523 aaKnown RBP18.99■□□□□ 0.63
PSPC1-202ENST00000427943 HS3ST4Q9Y661 456 aa18.99■□□□□ 0.63
PSPC1-202ENST00000427943 PCNX2A6NKB5 2137 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 TPRP12270 2363 aaKnown RBP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 A0A1B0GTW7 788 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 GOLGA6L22H0YM25 854 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 GOLGA8SH3BPF8 625 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 EPHB6O15197 1021 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 OPHN1O60890 802 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 GFPT2O94808 682 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SRPRAP08240 638 aaKnown RBP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SYPP08247 313 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 ECT2LQ008S8 904 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 GRIK2Q13002 908 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 AUHQ13825 339 aaKnown RBP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 TTC31Q49AM3 519 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 CXorf57Q6NSI4 855 aaKnown RBP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SASS6Q6UVJ0 657 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 ERICH1Q86X53 443 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 XYLT1Q86Y38 959 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SLC20A1Q8WUM9 679 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 C18orf8Q96DM3 657 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SIK2Q9H0K1 926 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 NLRC4Q9NPP4 1024 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 ANLNQ9NQW6 1124 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SLCO3A1Q9UIG8 710 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 STAP1Q9ULZ2 295 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 SLCO1B1Q9Y6L6 691 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 ITIH6Q6UXX5 1313 aa18.98■□□□□ 0.63
PSPC1-202ENST00000427943 CHD8Q9HCK8 2581 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 ACACBO00763 2458 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 PAGE1O75459 146 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 SEMA4FO95754 770 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 TPM2P07951 284 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 C7P10643 843 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 CEACAM1P13688 526 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 GABRB2P47870 512 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 POLR2FP61218 127 aaKnown RBP18.97■□□□□ 0.63
PSPC1-202ENST00000427943 NOMO3P69849 1222 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 ZBTB16Q05516 673 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 SEMA3BQ13214 749 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 STX1AQ16623 288 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 FKBP15Q5T1M5 1219 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 C9orf64Q5T6V5 341 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 NAA35Q5VZE5 725 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 C14orf80Q86SX3 495 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 OR52K2Q8NGK3 314 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 GANCQ8TET4 914 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 CPA5Q8WXQ8 436 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 TBCBQ99426 244 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 BTBD1Q9H0C5 482 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 PABPC3Q9H361 631 aaKnown RBP18.97■□□□□ 0.63
PSPC1-202ENST00000427943 SERGEFQ9UGK8 458 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 ANGPTL2Q9UKU9 493 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 SNX10Q9Y5X0 201 aa18.97■□□□□ 0.63
PSPC1-202ENST00000427943 EDDM13A0A1B0GTR0 161 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 I6L893 689 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 MID1O15344 667 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 RNASEH1O60930 286 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 ADCY5O95622 1261 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 LSM8O95777 96 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 FLT3P36888 993 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 COPB1P53618 953 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 DEUP1Q05D60 604 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 SLC12A1Q13621 1099 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 CST6Q15828 149 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 TRNP1Q6NT89 227 aa18.96■□□□□ 0.63
PSPC1-202ENST00000427943 MMAAQ8IVH4 418 aaKnown RBP18.96■□□□□ 0.63
PSPC1-202ENST00000427943 KDM1BQ8NB78 822 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms