RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 KLRF2D3W0D1 207 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 H0Y626 953 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 M0R2N6 131 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 M0R3G1 203 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSMD11O00231 422 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM38O00635 465 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SHOXO15266 292 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PMM2O15305 246 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RAD51BO15315 384 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 STX7O15400 261 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CLDN3O15551 220 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PHGDHO43175 533 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 DYNC1LI2O43237 492 aaPredicted RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZW10O43264 779 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GAS7O60861 476 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GLRA3O75311 464 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNNO75324 88 aaPredicted RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RFPL2O75678 378 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCNKO75909 580 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLEKHA8P1O95397 391 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SERPINE1P05121 402 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 UGT2B4P06133 528 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ITGAVP06756 1048 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 YES1P07947 543 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDH1P12830 882 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 COX4I1P13073 169 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC9A1P19634 815 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TGM1P22735 817 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RRM1P23921 792 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TBXAS1P24557 533 aaPredicted RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RBL1P28749 1068 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC7A1P30825 629 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 HSPA1LP34931 641 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM23P36406 574 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF76P36508 570 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 HPCAL1P37235 193 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 MCAMP43121 646 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ETV4P43268 484 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAPKAPK2P49137 400 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FMO5P49326 533 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TUFMP49411 452 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 HLCSP50747 726 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 NAPAP54920 295 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 MFAP3P55082 362 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TAP1Q03518 808 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 BAMBIQ13145 260 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CBLBQ13191 982 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM28Q13263 835 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GRB10Q13322 594 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDK10Q15131 360 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANGPT1Q15389 498 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SF3B4Q15427 424 aaKnown RBP eCLIP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CHI3L2Q15782 390 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 AARS2Q5JTZ9 985 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RBM48Q5RL73 367 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCNYL2Q5T2Q4 361 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRRC38Q5VT99 294 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GPR107Q5VW38 600 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PDPK2PQ6A1A2 396 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 IQSEC1Q6DN90 963 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 OGFOD2Q6N063 350 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZCCHC8Q6NZY4 707 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM117BQ6P1L5 589 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRMT9Q6P2P2 845 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 C16orf46Q6P387 395 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF773Q6PK81 442 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZBTB49Q6ZSB9 765 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TOM1L2Q6ZVM7 507 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RFPL4BQ6ZWI9 263 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PTF1AQ7RTS3 328 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT7Q86SF2 657 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TTC7BQ86TV6 843 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADCK1Q86TW2 530 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT13Q8IUC8 556 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CADM3Q8N126 398 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF786Q8N393 782 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC15A4Q8N697 577 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAGEB6Q8N7X4 407 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANKFN1Q8N957 763 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM174AQ8TBP5 190 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC44A1Q8WWI5 657 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC35C1Q96A29 364 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRRC59Q96AG4 307 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ACDQ96AP0 544 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 OMA1Q96E52 524 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 EEF2KMTQ96G04 330 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SPATA17Q96L03 361 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RDH12Q96NR8 316 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM111AQ96PZ2 611 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CRAMP1Q96RY5 1269 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SYT11Q9BT88 431 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CHID1Q9BWS9 393 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 NPLQ9BXD5 320 aaPredicted RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 INTS2Q9H0H0 1204 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 KCNN2Q9H2S1 579 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SERHL2Q9H4I8 314 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 POLR1BQ9H9Y6 1135 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms