RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ERICH1Q86X53 443 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF677Q86XU0 584 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF366Q8N895 744 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 OR2I1PQ8NGU4 316 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 GPT2Q8TD30 523 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 C18orf8Q96DM3 657 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 MYEOVQ96EZ4 313 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 RPRD1AQ96P16 312 aaPredicted RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 BTBD1Q9H0C5 482 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 VPS16Q9H269 839 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ERVW-1Q9UQF0 538 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 NCKAP1Q9Y2A7 1128 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ACACBO00763 2458 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 CKAP5Q14008 2032 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 NUMA1Q14980 2115 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 MAP1BP46821 2468 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 EDDM13A0A1B0GTR0 161 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 TARSL2A2RTX5 802 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 UPK3BL1B0FP48 263 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 UPK3BL2E5RIL1 263 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MAOBP27338 520 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 PMLP29590 882 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 GABRB2P47870 512 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 RNASE9P60153 205 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 RPS14P62263 151 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MYL5Q02045 173 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 AUHQ13825 339 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 KRT31Q15323 416 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 STX1AQ16623 288 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 BRMS1LQ5PSV4 323 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 FAM102AQ5T9C2 384 aaPredicted RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MMS22LQ6ZRQ5 1243 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 USP30Q70CQ3 517 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 FAM124AQ86V42 546 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 CCAR2Q8N163 923 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MINDY1Q8N5J2 469 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 PGAP3Q96FM1 320 aaPredicted RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MYO19Q96H55 970 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 PRMT1Q99873 361 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MIR1-1HGQ9H1L0 117 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 RSPH9Q9H1X1 276 aaPredicted RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 WDCPQ9H6R7 721 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 SGK2Q9HBY8 427 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 ANGPTL2Q9UKU9 493 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 INTS6Q9UL03 887 aaKnown RBP10.5□□□□□ -0.73
COMMD1-202ENST00000427417 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 PCDH15Q96QU1 1955 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 CACNA1EQ15878 2313 aa10.5□□□□□ -0.73
COMMD1-202ENST00000427417 MUC22E2RYF6 1773 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 BCAT2O15382 392 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 CLDN11O75508 207 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SEMA4FO95754 770 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 TOP3BO95985 862 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 PDGFRAP16234 1089 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SPINK2P20155 84 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SULT1E1P49888 294 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 PLK1P53350 603 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 POLR2FP61218 127 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 DEUP1Q05D60 604 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF252P-AS1Q0IIN9 211 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SEMA3BQ13214 749 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SLC14A1Q13336 389 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF177Q13360 481 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 HNRNPDQ14103 355 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SLC25A52Q3SY17 297 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 CCDC183Q5T5S1 534 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 FBXL22Q6P050 247 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 IL27RAQ6UWB1 636 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 XYLT1Q86Y38 959 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 ZCCHC9Q8N567 271 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 DEFB124Q8NES8 71 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 EPS8L1Q8TE68 723 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 GANCQ8TET4 914 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SNX19Q92543 992 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 MRGPRX3Q96LB0 322 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SPAG5Q96R06 1193 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 NPY6RQ99463 290 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 TKTL2Q9H0I9 626 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 FAM207AQ9NSI2 230 aaPredicted RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 DNAAF2Q9NVR5 837 aaKnown RBP10.49□□□□□ -0.73
COMMD1-202ENST00000427417 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 ARHGEF38Q9NXL2 777 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SLC25A13Q9UJS0 675 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 HS3ST4Q9Y661 456 aa10.49□□□□□ -0.73
COMMD1-202ENST00000427417 SIN3BO75182 1162 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 PAGE1O75459 146 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 KRT37O76014 449 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 GFPT2O94808 682 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 ADH1BP00325 375 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 MMEP08473 750 aa10.48□□□□□ -0.73
COMMD1-202ENST00000427417 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
COMMD1-202ENST00000427417 ACSL1P33121 698 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms