RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 MEI4A8MW99 385 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 CCDC22O60826 627 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 KRT36O76013 467 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 ALDH1A2O94788 518 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 STK10O94804 968 aaKnown RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 PGAM1P18669 254 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 CALB2P22676 271 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 LRPAP1P30533 357 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 GLUD2P49448 558 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 NAA25Q14CX7 972 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 C4orf22Q6V702 233 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 MARK2Q7KZI7 788 aaKnown RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 RSPH3Q86UC2 560 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 C10orf107Q8IVU9 208 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 DNAAF3Q8N9W5 541 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 MTBPQ96DY7 904 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 C7orf26Q96N11 449 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 TLE6Q9H808 572 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 NUDT5Q9UKK9 219 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 B2RBV5 119 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 DNAJC6O75061 913 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 SNNO75324 88 aaPredicted RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 UPP2O95045 317 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 POMCP01189 267 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 FGF3P11487 239 aaPredicted RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 GNAZP19086 355 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 PGFP49763 221 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 CPT1AP50416 773 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 SERPINB9P50453 376 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 PAFAH1B3Q15102 231 aaKnown RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 TIGD5Q53EQ6 642 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 ACSBG2Q5FVE4 666 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 MBLAC2Q68D91 279 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 TRIM68Q6AZZ1 485 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 ARHGAP36Q6ZRI8 547 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 C2orf69Q8N8R5 385 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 MCUR1Q96AQ8 359 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 MLPHQ9BV36 600 aaPredicted RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 CXorf56Q9H5V9 222 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
FIRRE-201ENST00000427391 PNPOQ9NVS9 261 aa11.91□□□□□ -0.5
FIRRE-201ENST00000427391 ARL5CA6NH57 179 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 PRR5-ARHGAP8B1AHC4 643 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 PPP1R12AO14974 1030 aaPredicted RBP11.9□□□□□ -0.5
FIRRE-201ENST00000427391 PLIN3O60664 434 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 LTFP02788 710 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 GSTA2P09210 222 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 SRGAP2BP0DMP2 458 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 NFKB1P19838 968 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 BDNFP23560 247 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TYK2P29597 1187 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 NUMBP49757 651 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 ARHGAP8P85298 464 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 IRF9Q00978 393 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 PCLAFQ15004 111 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 HSP90AA5PQ58FG0 334 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TEDDM1Q5T9Z0 273 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
FIRRE-201ENST00000427391 AGMOQ6ZNB7 445 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 POU5F2Q8N7G0 328 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 RBM15BQ8NDT2 890 aaKnown RBP11.9□□□□□ -0.5
FIRRE-201ENST00000427391 SCAMP5Q8TAC9 235 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 KCTD13Q8WZ19 329 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 CERS2Q96G23 380 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TKTL2Q9H0I9 626 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TMLHEQ9NVH6 421 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 WFS1O76024 890 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 THP07101 528 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 SAT1P21673 171 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 SEMA3BQ13214 749 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 GNASQ5JWF2 1037 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 EP400NLQ6ZTU2 488 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 OTOP3Q7RTS5 596 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 DCLK2Q8N568 766 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TEX9Q8N6V9 391 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 RTP3Q9BQQ7 232 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 COLEC11Q9BWP8 271 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 CHRAC1Q9NRG0 131 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 KCNK4Q9NYG8 393 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 RCOR3Q9P2K3 495 aaPredicted RBP11.9□□□□□ -0.5
FIRRE-201ENST00000427391 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 INPP5FQ9Y2H2 1132 aa11.9□□□□□ -0.5
FIRRE-201ENST00000427391 CAPN14A8MX76 684 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 HHLA1C9JL84 531 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 LRIG2O94898 1065 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 JCHAINP01591 159 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 CHRNA1P02708 482 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 MLNP12872 115 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 PTDSS1P48651 473 aaKnown RBP11.9□□□□□ -0.51
FIRRE-201ENST00000427391 PCBP1Q15365 356 aaKnown RBP eCLIP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms