RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 NDUFB7P17568 137 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 VCAM1P19320 739 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 PCSK6P29122 969 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 GNAQP50148 359 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 GHRHRQ02643 423 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 TMEM119Q4V9L6 283 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 SLC44A4Q53GD3 710 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 CLEC17AQ6ZS10 378 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 ZNF366Q8N895 744 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 C9orf106Q8NAJ2 232 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 TBC1D5Q92609 795 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 SLC13A1Q9BZW2 595 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 SH2D4AQ9H788 454 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 ARHGEF3Q9NR81 526 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 MRPS18AQ9NVS2 196 aaKnown RBP6.16□□□□□ -1.42
C9orf3-205ENST00000427193 DKK3Q9UBP4 350 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 ZDHHC8Q9ULC8 765 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 RAD54BQ9Y620 910 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 USP34Q70CQ2 3546 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 CHD9Q3L8U1 2897 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 CHD7Q9P2D1 2997 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 ATP2A1O14983 1001 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 SLC16A6O15403 523 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 JTBO76095 146 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 PARP1P09874 1014 aaKnown RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 GOLGA8HP0CJ92 632 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 CERS1P27544 350 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 KIF5BP33176 963 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 HMGN5P82970 282 aaKnown RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 MAPK7Q13164 816 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 STK3Q13188 491 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 PFKFB3Q16875 520 aaPredicted RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 ZNF618Q5T7W0 954 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 MAP3K21Q5TCX8 1036 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 THEMIS2Q5TEJ8 643 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 ANKRD16Q6P6B7 361 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 CATSPERGQ6ZRH7 1159 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 NOL8Q76FK4 1167 aaKnown RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 PPP1R32Q7Z5V6 425 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 RAB11FIP4Q86YS3 637 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 ADGRF4Q8IZF3 695 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 CTCFLQ8NI51 663 aaPredicted RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 NELL2Q99435 816 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 TINAGL1Q9GZM7 467 aaPredicted RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 RANBP17Q9H2T7 1088 aaKnown RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 CPVLQ9H3G5 476 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 WDCPQ9H6R7 721 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 AS3MTQ9HBK9 375 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 SLAMF7Q9NQ25 335 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 AGAP1Q9UPQ3 857 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 MTMR6Q9Y217 621 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 SLC45A1Q9Y2W3 748 aa6.15□□□□□ -1.42
C9orf3-205ENST00000427193 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.15□□□□□ -1.42
C9orf3-205ENST00000427193 BAZ2BQ9UIF8 2168 aaKnown RBP6.15□□□□□ -1.43
C9orf3-205ENST00000427193 REV3LO60673 3130 aa6.15□□□□□ -1.43
C9orf3-205ENST00000427193 PTPRFP10586 1907 aa6.15□□□□□ -1.43
C9orf3-205ENST00000427193 LOC285556D6RIA3 1793 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 ATAD5Q96QE3 1844 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 ESYT2A0FGR8 921 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 hCG_1984214I3L0E3 225 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 ADAMTS3O15072 1205 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 EDIL3O43854 480 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 DTNBO60941 627 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 VPS4BO75351 444 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 KIF20AO95235 890 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 DEXIO95424 95 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 JUPP14923 745 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 CHRM3P20309 590 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SYT1P21579 422 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 KELP23276 732 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 GJB2P29033 226 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SLC1A4P43007 532 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 GCLCP48506 637 aaPredicted RBP6.14□□□□□ -1.43
C9orf3-205ENST00000427193 TOB1P50616 345 aaPredicted RBP6.14□□□□□ -1.43
C9orf3-205ENST00000427193 HMGCS2P54868 508 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 PKP1Q13835 747 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 FAM83BQ5T0W9 1011 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 TREML2Q5T2D2 321 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 ZNF626Q68DY1 528 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SYNE3Q6ZMZ3 975 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SPICE1Q8N0Z3 855 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 MIER2Q8N344 545 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 ZNF713Q8N859 430 aaPredicted RBP6.14□□□□□ -1.43
C9orf3-205ENST00000427193 PHKBQ93100 1093 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 AIFM3Q96NN9 605 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SLC38A10Q9HBR0 1119 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 SH3GLB2Q9NR46 395 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 FBXO28Q9NVF7 368 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 BARHL2Q9NY43 387 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 FEM1BQ9UK73 627 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 MYH8P13535 1937 aa6.14□□□□□ -1.43
C9orf3-205ENST00000427193 TRANK1O15050 2925 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms