RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF195O14628 629 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 TPH1P17752 444 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 LMO2P25791 158 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 EPHA3P29320 983 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 ALDH1A3P47895 512 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 PKNOX1P55347 436 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 VGLL4Q14135 290 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 PKDCCQ504Y2 493 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 PPM1LQ5SGD2 360 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 STXBP5Q5T5C0 1151 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 STEAP4Q687X5 459 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 ADGRG6Q86SQ4 1221 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF567Q8N184 647 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 TDRD5Q8NAT2 981 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 USP13Q92995 863 aaPredicted RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 CDRT15Q96T59 188 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 STN1Q9H668 368 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 TNS1Q9HBL0 1735 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 TUBGCP4Q9UGJ1 667 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 AMHP03971 560 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CHRNGP07510 517 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MLNP12872 115 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SPRP35270 261 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GRIA2P42262 883 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GLRBP48167 497 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 DEUP1Q05D60 604 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 EML3Q32P44 896 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 Q3C1V9 767 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 FSTL4Q6MZW2 842 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SNX32Q86XE0 403 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 TTC39CQ8N584 583 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 JADE3Q92613 823 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ZMAT2Q96NC0 199 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 OLFM3Q96PB7 478 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 KCNK16Q96T55 309 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 UNKQ9C0B0 810 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CDH19Q9H159 772 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM96AQ9H5X1 160 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 DMAP1Q9NPF5 467 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 TCF7L2Q9NQB0 619 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 LTFP02788 710 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF286BP0CG31 522 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MYL4P12829 197 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ENO3P13929 434 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 TCN1P20061 433 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MPSTP25325 297 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 PTPN9P43378 593 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 HARS2P49590 506 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MRPS22P82650 360 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 DYNC1I2Q13409 638 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 LAMB3Q13751 1172 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 HNRNPDQ14103 355 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 KIZQ2M2Z5 673 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CYS1Q717R9 158 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 APOBEC3FQ8IUX4 373 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GALNT4Q8N4A0 578 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC2A14Q8TDB8 520 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SREK1Q8WXA9 508 aaKnown RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MFSD3Q96ES6 412 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 OTUD5Q96G74 571 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SCYL1Q96KG9 808 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MARK4Q96L34 752 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 LRGUKQ96M69 825 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 NDNQ99608 321 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GATA5Q9BWX5 397 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 BFARQ9NZS9 450 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC39A10Q9ULF5 831 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 TRIM13O60858 407 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 USP2O75604 605 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 C2P06681 752 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SETSIPP0DME0 302 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ATP6V1B1P15313 513 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GNL1P36915 607 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 RPS6KA3P51812 740 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CHN2P52757 468 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CBLBQ13191 982 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CNGA3Q16281 694 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 INSCQ1MX18 579 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CERCAMQ5T4B2 595 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF618Q5T7W0 954 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 GRTP1Q5TC63 336 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 MAP3K21Q5TCX8 1036 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 FBXL19Q6PCT2 694 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 IYDQ6PHW0 289 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 EPGNQ6UW88 154 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC26A9Q7LBE3 791 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 ACVR1CQ8NER5 493 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 PIP4K2CQ8TBX8 421 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 RNF139Q8WU17 664 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 CPNE1Q99829 537 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 NUF2Q9BZD4 464 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 C20orf96Q9NUD7 363 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 KLK14Q9P0G3 267 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 PCDHB12Q9Y5F1 795 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 AK5Q9Y6K8 562 aa7.7□□□□□ -1.18
SMARCC1-202ENST00000425518 TSPAN1O60635 241 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PIK3R1P27986 724 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms